Pairwise Alignments

Query, 385 a.a., CPS-53 (KpLE1) prophage; predicted prophage CPS-53 integrase (NCBI) from Escherichia coli BW25113

Subject, 402 a.a., Integrase from Dechlorosoma suillum PS

 Score =  233 bits (593), Expect = 9e-66
 Identities = 142/398 (35%), Positives = 229/398 (57%), Gaps = 22/398 (5%)

Query: 2   LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQ 61
           LT   I+A+KP +KPY++ D  GL+L V  +G K W+++Y+  GKEK+L +G YP ++L+
Sbjct: 3   LTELAIKASKPADKPYKVSDERGLFLLVNPNGSKYWRVKYRFLGKEKLLALGVYPEVSLK 62

Query: 62  EARDKAWTARKDISVGIDPVKAKKAS------SNNNSFSAIYKEWYEHKKQVWSVGYATE 115
           +AR++   AR+ ++ G+DP   K+A+      +  NSF A+ +EW+  K   WS  Y+ +
Sbjct: 63  QARERRDDARRLLANGVDPGFHKQATKMAMVANAANSFEAVAREWWAKKSVGWSASYSNK 122

Query: 116 LAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTG 175
           + ++F+ D+ P +G   I DI   ++L V+RR E RG +E A+ A R  G+ FRYA+VTG
Sbjct: 123 VIRLFERDVFPWVGARPIADITAPEMLAVVRRIEARGVIETAHLALRVSGQAFRYAVVTG 182

Query: 176 RAKYNPAPDLADAMKGYRKKNFPFL-PADQIPAFNKALATFSGSIVSLIATKVLRYTALR 234
           RA+ +P  DL  A+   +  +F  +   +++    +A+  FSG+ V L A K+     +R
Sbjct: 183 RAERSPVGDLRGALPPVKVSHFAAITEPEKVGELLRAIDAFSGTFVVLCALKLAPLFFVR 242

Query: 235 TKELRSMLWKNVDFEN---RIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEF 291
             ELR   W++ D E    R +     V K +  H+VP++ Q + +L  L ++T    +F
Sbjct: 243 PGELRHARWRDFDLERGEWRYL-----VTKTQTQHLVPLATQAIGILRELYALTGR-GDF 296

Query: 292 VFAGRNDKKKPICENAVLLVIKQIGYEGLE--SGHGFRHEFSTIMNE--HEWPADAIEVQ 347
           VF GR D+  P+    +   ++++GY      +GHGFR    TI+ E  H  P + IE Q
Sbjct: 297 VFPGR-DRANPMSGATINAALRRMGYNTQTDITGHGFRAMARTILAEELHVKP-EVIEHQ 354

Query: 348 LAHANGGSVRGIYNHAQYLDKRREMMQWWADWLDEKVE 385
           LAH    ++   YN  ++L +RR MMQ WA++LD   E
Sbjct: 355 LAHRVPDNLGTAYNRTKFLKERRVMMQEWANYLDNLKE 392