Pairwise Alignments

Query, 385 a.a., CPS-53 (KpLE1) prophage; predicted prophage CPS-53 integrase (NCBI) from Escherichia coli BW25113

Subject, 433 a.a., Integrase from Dechlorosoma suillum PS

 Score =  259 bits (662), Expect = 1e-73
 Identities = 149/394 (37%), Positives = 222/394 (56%), Gaps = 14/394 (3%)

Query: 2   LTVKQIEAAKPKEKPYRLLDGNGLYLYVPVSGKKVWQLRYKIDG-KEKILTVGKYPLMTL 60
           LT  ++  AKP EKPY+L DG GLYL V  SG K W+ RY I   K+ I T+G+YP+++L
Sbjct: 5   LTDTKVRNAKPAEKPYKLQDGQGLYLDVRPSGAKFWRYRYWITPEKDGIYTIGEYPVVSL 64

Query: 61  QEARDKAWTARKDISVGIDPVKAKKAS------SNNNSFSAIYKEWYEHKKQVWSVGYAT 114
            +AR +   AR+    GI+P  AK+A        + N+F A+ +EW +  +  W+  Y  
Sbjct: 65  SDARREREWAREQAKQGINPTHAKEAERLRRMGEHANTFEAVAREWIDQNRNHWTEKYLY 124

Query: 115 ELAKMFDDDILPIIGGLEIQDIEPMQLLEVIRRFEDRGAMERANKARRRCGEVFRYAIVT 174
           ++ +   +D+ P IG L I+ +    LL +IR  E+RGA   A   R+  G++FRYA+ T
Sbjct: 125 QVERFLGNDVFPKIGALPIRMVTSAHLLGIIRTVEERGAKSIAVLIRQWSGQIFRYAVAT 184

Query: 175 GRAKYNPAPDLADAMKGYRKKNFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALR 234
            RA  +P+  L  A+K    ++ P L  D+IP     L  + G   +++ATK++ YT +R
Sbjct: 185 LRADSDPSAPLRGAIKKDPVRHNPPLSKDEIPVMLNKLQKYGGYRGTVLATKLMLYTFVR 244

Query: 235 TKELRSMLWKNVDFENRIITIDASVMKGRK------IHVVPMSDQVVELLTTLSSITKPV 288
           T ELR   W   D E     + A  MK +K       H+VP+S Q +E+L  L +++   
Sbjct: 245 TVELRKAEWTEFDLEGGEWRVPADRMKMKKQMKVGESHIVPLSRQALEVLKELKTLSGG- 303

Query: 289 SEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQL 348
            +F+F         +    +   ++++GY G  SGHGFR   ST+++E  W   AIE QL
Sbjct: 304 RKFLFPNLRTPDTCMTATTINKALERMGYAGKFSGHGFRATASTMLHELGWNEKAIERQL 363

Query: 349 AHANGGSVRGIYNHAQYLDKRREMMQWWADWLDE 382
           AHA    V+  YNHA+YL +RREMMQ W+DW+DE
Sbjct: 364 AHAERNKVKAAYNHAEYLPERREMMQAWSDWIDE 397