Pairwise Alignments

Query, 325 a.a., NADH dehydrogenase subunit H (NCBI) from Escherichia coli BW25113

Subject, 332 a.a., respiratory-chain NADH dehydrogenase subunit 1 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  102 bits (255), Expect = 1e-26
 Identities = 84/310 (27%), Positives = 145/310 (46%), Gaps = 28/310 (9%)

Query: 23  LVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVI 82
           L  +  G F+   +RR+    Q R GP  +      Q   D+ K+F KE  +P  ++R  
Sbjct: 29  LFALAVGLFLKGLDRRIEARLQRRVGPPLI------QPYLDIAKLFTKETVMPASANRAA 82

Query: 83  FTLAPMIAFTSLLLAFAIVPVS--PGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNK 140
           F LAP++  T + +  A++PV    G + A  ++ ++F+L+   L   A++  G +S++ 
Sbjct: 83  FLLAPLLGLTGMAVCAALLPVPGVSGGLPAMGDLLVIFYLLP--LPAIALMVGGSASSSP 140

Query: 141 YSLLGAMRASAQTLSYEVFLGLSLMGVVAQAG-------SFNMTDIVNSQAHVWNV---- 189
           +  +G  R      +YE+ L   ++ V  + G        F++ +IV+ Q     +    
Sbjct: 141 FGAMGFSREMTLMFAYEMPLLAVMLAVAMKVGMATGGGAEFSLANIVDYQLANGQLALDP 200

Query: 190 --IPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIVT 247
             IP    ++ F    +      PFD PEAE E+ +G  +EYSG     F +   +  V 
Sbjct: 201 VMIPALLAYLLFLPGTMGTV---PFDVPEAETEIIEGPLLEYSGPALAFFHIASALKTVV 257

Query: 248 ISALMVTLFFGGW-QGPLLPPFIWFALKTAFFMMMFI-LIRASLPRPRYDQVMSFGWKIC 305
           +  L V LF  G   G ++    WF LK A  M + + L++++  R R DQ  +F  K  
Sbjct: 258 VLGLGVALFLPGTVPGGIVANIPWFVLKCAALMAVSLTLVKSATGRFRVDQAFTFYLKYP 317

Query: 306 LPLTLINLLV 315
             L L +L++
Sbjct: 318 SVLALASLVL 327