Pairwise Alignments

Query, 325 a.a., NADH dehydrogenase subunit H (NCBI) from Escherichia coli BW25113

Subject, 345 a.a., NADH dehydrogenase (quinone) (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  253 bits (647), Expect = 4e-72
 Identities = 131/309 (42%), Positives = 189/309 (61%), Gaps = 12/309 (3%)

Query: 12  LLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKE 71
           +L I + + +L  V+    F+ +G+R++    Q R GPN VG  G LQ VAD +K   KE
Sbjct: 13  VLIIAQCLAVLGFVMVSLLFLVYGDRKIWAAVQMRRGPNVVGAFGLLQTVADALKYVVKE 72

Query: 72  DWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVL 131
             +P  +D+ +F LAPM +F   ++A+A++P + GWV+AD+N+ IL+   ++ L VY V+
Sbjct: 73  VVVPAGADKPVFMLAPMTSFVLAMIAWAVIPFNDGWVLADINVAILYVFAVSSLEVYGVI 132

Query: 132 FAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSFNMTDIVNSQ-----AHV 186
             GW+SN+KY  LG++R++AQ +SYEV +GL ++GV+   GS N + IV +Q        
Sbjct: 133 MGGWASNSKYPFLGSLRSAAQMISYEVSIGLIIIGVILSTGSMNFSAIVAAQDGDFGFFS 192

Query: 187 WNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIV 246
           W  +P       F I+ +A  +R PFD PEAE EL  GY +EYS   F LF  GEYI I 
Sbjct: 193 WYWLPHLPMVFLFFISALAETNRPPFDLPEAESELVAGYQVEYSSTPFLLFMAGEYIAIF 252

Query: 247 TISALMVTLFFGGWQGPLLPPF-----IWFALKTAFFMMMFILIRASLPRPRYDQVMSFG 301
            + AL+  LFFGGW  P+  PF     IW   K AFF  +F +++A +PR RYDQ+M  G
Sbjct: 253 LMCALITLLFFGGWLSPI--PFLPDGPIWMVGKMAFFFFLFAMVKAIVPRYRYDQLMRLG 310

Query: 302 WKICLPLTL 310
           WK+ LP +L
Sbjct: 311 WKVFLPFSL 319