Pairwise Alignments

Query, 325 a.a., NADH dehydrogenase subunit H (NCBI) from Escherichia coli BW25113

Subject, 358 a.a., NADH dehydrogenase I, chain H (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  260 bits (665), Expect = 3e-74
 Identities = 130/345 (37%), Positives = 205/345 (59%), Gaps = 27/345 (7%)

Query: 2   SWISPELIEIL----LTILKAVVILLVVVTCGAFMS----FGERRLLGLFQNRYGPNRVG 53
           +WI   L+ ++       ++ + + + +V   A ++    + ER++ G FQ R GPNRVG
Sbjct: 9   NWIHEMLLSVMPEGWAIFIECIAVGVCIVALYAILAIVLIYMERKVCGFFQCRLGPNRVG 68

Query: 54  WGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLN 113
             GS+Q++ D++KM  KE + PK +DR ++ LAP +   +  L FA +P + G  + + N
Sbjct: 69  KWGSIQVICDVLKMLTKEIFTPKDADRFLYNLAPFMVIIASFLTFACIPFNKGAEILNFN 128

Query: 114 IGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGS 173
           +G+ F L  + + V  +L AGW SNNK+SL+GAMR+ AQ +SYE+ +G+S+M +V   G+
Sbjct: 129 VGVFFLLAASSIGVVGILLAGWGSNNKFSLIGAMRSGAQIISYELSVGMSIMTMVVLMGT 188

Query: 174 FNMTDIVNSQAHVWNV----IPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEY 229
              ++IV  QA  W +    IP    FI + IAG A C+R PFD PEAE EL  GYH EY
Sbjct: 189 MQFSEIVEGQADGWFIFKGHIPAVIAFIIYLIAGNAECNRGPFDLPEAESELTAGYHTEY 248

Query: 230 SGMKFGLFFVGEYIGIVTISALMVTLFFGGWQGPL--------------LPPFIWFALKT 275
           SGM FG F++ EY+ +  ++++  T+F GGW  PL              +P FIWF  K 
Sbjct: 249 SGMHFGFFYLAEYLNLFIVASVAATIFLGGWM-PLHIIGLDGFNAVMDYIPGFIWFFAKA 307

Query: 276 AFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTAAVI 320
            F + + + I+ + PR R DQ+++  WK  +P++++NLL+ A  +
Sbjct: 308 FFVVFLLMWIKWTFPRLRIDQILNLEWKYLVPISMVNLLLMACCV 352