Pairwise Alignments

Query, 367 a.a., outer membrane porin protein C (NCBI) from Escherichia coli BW25113

Subject, 370 a.a., porin OmpC from Pantoea sp. MT58

 Score =  420 bits (1080), Expect = e-122
 Identities = 222/383 (57%), Positives = 265/383 (69%), Gaps = 29/383 (7%)

Query: 1   MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKVDGLHYFSDNKDVDGDQTYMRLG 60
           MK   L++L+  L +A AA AAE+YNKDGNKLDLYGKV   HY SDN   DGD++Y R+G
Sbjct: 1   MKKSTLAMLLSTLTLASAAQAAEIYNKDGNKLDLYGKVKAEHYISDNASQDGDKSYTRIG 60

Query: 61  FKGETQVTDQLTGYGQWEYQIQGNSAEN---ENNSWTRVAFAGLKFQDVGSFDYGRNYGV 117
           FKG+TQ+ D +TGYGQWEYQ   N++E     N + TR+ FAGLKF   GS DYGRNYGV
Sbjct: 61  FKGQTQINDLMTGYGQWEYQYNVNNSEGSDANNGNKTRLGFAGLKFSQYGSVDYGRNYGV 120

Query: 118 VYDVTSWTDVLPEFGGD-TYGSDNFMQQRGNGFATYRNTDFFGLVDGLNFAVQYQGKNGN 176
           +YDV +WTDV PEFGGD T  SDNFM QR  G ATYRN +FFGLVDGL FA+QYQGKN  
Sbjct: 121 LYDVEAWTDVFPEFGGDGTARSDNFMTQRATGVATYRNNNFFGLVDGLKFALQYQGKNDA 180

Query: 177 PSGEGFTSGVTNNGRDALRQNGDGVGGSITYDY--EGFGIGGAISSSKRTDAQNTAAYIG 234
            S        TN   D  RQNGDG G S+ Y     G  +  AI+SS RT+ Q   AY G
Sbjct: 181 SS--------TNTRTDINRQNGDGYGASLGYALGDSGVSLMSAITSSDRTNQQQARAY-G 231

Query: 235 NGDRAETYTGGLKYDANNIYLAAQYTQTYN---------ATRVGSLGWANKAQNFEAVAQ 285
            GDRA+++  G+KYDAN++YLAA YT T N         AT     G ANKAQN E VAQ
Sbjct: 232 GGDRADSWGAGVKYDANSVYLAAIYTDTRNMTPISGTNRATGAAVAGAANKAQNIELVAQ 291

Query: 286 YQFDFGLRPSLAYLQSKGKNLGRGYDDEDILKYVDVGATYYFNKNMSTYVDYKINLL-DD 344
           YQFDFGLRPS+ Y+Q+KGK++  G  D D++KY+DVGATYYFNKNMS +VDYKIN L DD
Sbjct: 292 YQFDFGLRPSIGYVQTKGKDIENGIGDADLVKYIDVGATYYFNKNMSAFVDYKINQLPDD 351

Query: 345 NQFTRDAGINTDNIVALGLVYQF 367
           N  +    +N D+IVA+G+ YQF
Sbjct: 352 NALS----LNNDDIVAMGVTYQF 370