Pairwise Alignments

Query, 547 a.a., fused predicted multidrug transport subunits of ABC superfamily: membrane component/ATP-binding component (NCBI) from Escherichia coli BW25113

Subject, 560 a.a., peptide ABC transporter from Herbaspirillum seropedicae SmR1

 Score =  253 bits (645), Expect = 2e-71
 Identities = 165/539 (30%), Positives = 264/539 (48%), Gaps = 32/539 (5%)

Query: 20  ALSLASAALGIGLIAFINQRLIETADTSL-----LVLPEFLGLLLLLMAVTLGSQLALTT 74
           A + AS A G+  I  + Q     A T            F   +L L    +   +    
Sbjct: 15  AATAASVARGVCSILMVTQITATLAATQAPGWQSTAALHFALTVLALWLAHMTCNILFER 74

Query: 75  LGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLAGLTSDVRNITIAFVRLPELVQGIIL 134
           L H    + R    +R+L     R+EQ+G+ ++ A LT    N++  FV  P ++   I+
Sbjct: 75  LAHGVHAQSRRFICERVLHADYARLEQVGAPAIQAALTEHSTNVSTFFVSFPAILTNAIV 134

Query: 135 TIGSAAYLWMLSGKMLLVTAIWMAITIWGGFVLVARVYKHMATLRETEDKLYTDFQTVLE 194
             G   Y+  LS ++     + + +   G  +   R  +H+      +D+L++ F+++L+
Sbjct: 135 VSGCMIYMATLSAQVFACAVLVIGLGAAGYHLAHLRAIRHLRQASGEQDRLFSHFRSMLD 194

Query: 195 GRKELTLNRERAEYVFNNLYIPDAQEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFWMA 254
           G KEL LN  +       +        RH         ++A +W N ++   IGLV ++ 
Sbjct: 195 GAKELRLNGRKRRLFGREVLGQSIDRVRHERSLGMAIFVAATSWGNFLIYAFIGLVLFVL 254

Query: 255 NSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLTAQVAFNKLNKFALAPFKAEFPRP 314
                    +   Y++  +++ TPL   +   P    A+V+  ++++   A        P
Sbjct: 255 VGDVPDRNRILTGYAVLFIYMITPLEILLMNAPRANLAKVSARRIDEVVQALDNGRPRAP 314

Query: 315 -----------QAFPNWQTLELRNVTFAY----QDNAFSVGPINLTIKRGELLFLIGGNG 359
                      Q  P  Q L+L  V   Y     D  F++GPI+L    GE++FL+GGNG
Sbjct: 315 AAALPQQHQPHQPAPELQRLQLSGVLHRYYHEQHDEFFTMGPIDLAFAPGEVVFLVGGNG 374

Query: 360 SGKSTLAMLLTGLYQPQSGEILLDGKPVSGEQP-----------EDYRKLFSAVFTDVWL 408
           SGK+TLA LL GLY+P  G ILL+G+PVS +             E YR+LF+ VF+D  L
Sbjct: 375 SGKTTLAKLLAGLYRPGEGHILLNGRPVSWQPDVEGEGEARVPDEQYRQLFATVFSDFHL 434

Query: 409 FDQLLGPEGKPANPQLVEKWLAQLKMAHKLELSNGRIVNLKLSKGQKKRVALLLALAEER 468
           F+ LL   G   + +  E  LA+L + HK+++ +G      LS GQ+KR+AL++A+ E+R
Sbjct: 435 FESLLETGGAELDARGNEL-LAKLYLHHKVQIRDGAFTTRALSMGQRKRLALVVAVLEDR 493

Query: 469 DIILLDEWAADQDPHFRREFYQVLLPLMQEMGKTIFAISHDDHYFIHADRLLEMRNGQL 527
              + DEWAADQDP F++ FY  +L  ++  GKT+  ISHDD YF  ADR++ M NG++
Sbjct: 494 PFFIFDEWAADQDPVFKKVFYHEVLGQLRAAGKTVLVISHDDQYFHLADRMVRMDNGRV 552