Pairwise Alignments

Query, 828 a.a., nitrate reductase, periplasmic, large subunit (NCBI) from Escherichia coli BW25113

Subject, 905 a.a., Nitrate reductase (EC 1.7.99.4) (from data) from Pseudomonas fluorescens FW300-N2E3

 Score =  335 bits (859), Expect = 7e-96
 Identities = 237/790 (30%), Positives = 357/790 (45%), Gaps = 103/790 (13%)

Query: 46  CRFCGTGCGVLVGTQQGRVVACQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPLLRMK 105
           C +CG GCGVL+     +++   GDP  P N G  C KG  L        R   P LR+ 
Sbjct: 10  CCYCGVGCGVLIEHDGEQILGVSGDPTHPANFGKLCSKGSTLHLTGDLAARALYPELRLG 69

Query: 106 NGKYDKEGEFTPITWDQAFDVMEEKFKTALKEKGPESIGMFGSGQWTIWEGYAASKLFKA 165
            G      +     WD A D     F   + E GP+S+  + SGQ    + YA +KL +A
Sbjct: 70  KGMARSRTD-----WDTALDHATSVFADTIAEHGPDSVAFYISGQLLTEDYYAFNKLARA 124

Query: 166 GFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGANMAEMHPILWS 225
              +NNID N+R CM+SAVVG+ R+ G D P   Y+D+E +D  ++ G+NMA  HP+L+ 
Sbjct: 125 LVGTNNIDSNSRLCMSSAVVGYKRSLGADAPPCSYEDLELSDCVMIVGSNMAYAHPVLFR 184

Query: 226 RITNRRLSNQNVTVAVLSTYQHRSFELADNGIIFTPQSDLVILNYIANYIIQNNAINQDF 285
           R+   +     + V V+   +  + +LAD  +   P +D+ + + I + ++  + ++++F
Sbjct: 185 RLEEAKSRRPQMKVIVIDPRRTDTCDLADLHLAILPGTDVALFHGILHLLLWEDWVDREF 244

Query: 286 FSKHVNLRKGATDIGYGLRPTHPLEKAAKNPGSDASEPMSFEDYKAFVAEYTLEKTAEMT 345
              H                                      + K+ V +YT +  A++ 
Sbjct: 245 IKAHTE---------------------------------GLAELKSLVRDYTPQMVAQLC 271

Query: 346 GVPKDQLEQLAQLYADPNKKVISYWTMGFNQHTRGVWANNLVYNLHLLTGKISQPGCGPF 405
           G+  +QL+Q A+ +   +   +S W MG NQ T G   N+ + NLHL TG+I +PG GPF
Sbjct: 272 GISVEQLQQCAE-WVGTSSSFLSLWCMGLNQSTAGSAKNSALINLHLATGQIGRPGTGPF 330

Query: 406 SLTGQPSACGTAREVGTFAHRLPADMVVTNEKHRDICEKKWNIPSGTIPAKIGLHAVAQD 465
           SLTGQP+A G  RE G+ ++ LP      N +HR      W +    +P   GL A+   
Sbjct: 331 SLTGQPNAMG-GRETGSLSNLLPGHREAANAQHRAEVAAYWGVEK--LPDTTGLTAIELF 387

Query: 466 RALKDGKLNVYWTMCTNNMQAGPNINEERMPGWRDPRNFIIVSDPYPTV-SALAADLILP 524
             ++ GK+   W  CTN  Q+ P+    R      P  F+++ + + T  +A  ADL+LP
Sbjct: 388 EQVQSGKIKALWIACTNPAQSLPDQQTVRAALQACP--FVVLQEAFRTTETAPFADLLLP 445

Query: 525 TAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKSDLWQLVQFSRRFKTEEVWPEDLLAKKP 584
            A W EKEG   N+ERR    R+ + APGEA+ D    V F++R +        L   +P
Sbjct: 446 AASWGEKEGTVTNSERRISHVRRAINAPGEARPDWAITVDFAQRLERR------LRPGQP 499

Query: 585 ELRGKTLYEVLYATPEVSKFPVSELAEDQLNDESRELGFYLQKGLFEEYAWFGRGHGHDL 644
            L                                    F     +F+EY    RG   DL
Sbjct: 500 SL----------------------------------FAFEQPAQVFDEYKQLTRGRDLDL 525

Query: 645 APFDD--YHKARGLRWPVVNGKE--TQWRYSEGNDPYVKAGEGYKFYGKPDGKAVIFALP 700
                    +    +WP  +G    T   Y++G             +    G+A   A P
Sbjct: 526 CGISHALLDRLGPQQWPFPDGASSGTPRLYADG------------IFPTESGRAQFVADP 573

Query: 701 FEPAAEAPDEEYDLWLSTGRVLEHWHTGSMTRRVPELHRAFPEAVLFIHPLDAKARDLRR 760
           +  A E  D  + L L TGR+ + WH  S T    +L     EA+L +HP + +   L+ 
Sbjct: 574 YRAAKEQRDARFPLTLITGRLRDQWHGMSRTGTAAQLFGHVSEALLSLHPDELRRYRLQT 633

Query: 761 GDKVKVVSRRGEVISIVETRGRNRPPQGLVYMPFFDAAQL--VNKLTLDATDPLSKETDF 818
           GD V + SRRG VI  + +    RP Q  + M + D      VN LT  A DPLSK+ + 
Sbjct: 634 GDLVNLKSRRGSVIVAIGSDDSVRPGQAFLPMHWGDRFLKGGVNTLTQPAFDPLSKQPEL 693

Query: 819 KKCAVKLEKV 828
           K   V++E V
Sbjct: 694 KHSGVRIEPV 703