Pairwise Alignments

Query, 828 a.a., nitrate reductase, periplasmic, large subunit (NCBI) from Escherichia coli BW25113

Subject, 892 a.a., Nitrate reductase (EC 1.7.99.4) (from data) from Caulobacter crescentus NA1000

 Score =  282 bits (722), Expect = 5e-80
 Identities = 228/796 (28%), Positives = 353/796 (44%), Gaps = 112/796 (14%)

Query: 38  AIKWDKAPCRFCGTGCGVLVGTQQG-RVVACQGDPDAPVNRGLNCIKGYFLPKIMYGKDR 96
           A+   +  C +CG GCGV+  T  G R VA  GD   P N G  C KG  L   +    R
Sbjct: 7   ALTATRTACPYCGVGCGVIGATAAGARAVAISGDEAHPANHGRLCSKGTALGATVSLAGR 66

Query: 97  LTQPLLRMKNGKYDKEGEFTPITWDQAFDVMEEKFKTALKEKGPESIGMFGSGQWTIWEG 156
           L +P ++ ++            +WD+A  ++  +F+  +   GP+S+  + SGQ    + 
Sbjct: 67  LLEPTIQGRSA-----------SWDEATALVARRFRETIARHGPDSVAFYVSGQLLTEDY 115

Query: 157 YAASKLFKAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGANM 216
           Y A+KL K    S NID N+R CMASAVV   + FG D   GCY+D++ A+  V  G N 
Sbjct: 116 YVANKLMKGFIGSGNIDTNSRLCMASAVVAHKQAFGADLVPGCYEDLDLANLVVFSGHNA 175

Query: 217 AEMHPILWSRITNRRLSNQNVTVAVLSTYQHRSFELADNGIIFTPQSDLVILNYIANYII 276
           A  HP+L+ R+   +   Q   V  +   +  + E AD  +   PQSD+ + N +   +I
Sbjct: 176 AWTHPVLFRRMEAAKARGQKHVV--IDPRRTDTAEGADLHLALAPQSDVRLWNGLLADLI 233

Query: 277 QNNAINQDFFSKHVNLRKGATDIGYGLRPTHPLEKAAKNPGSDASEPMSFEDYKAFVAEY 336
           +  A++ DF   HV+        GY    T  L +  ++P + A++              
Sbjct: 234 RRGAVDMDFLRDHVD--------GYAAVITS-LAEDDQSPAAVAAD-------------- 270

Query: 337 TLEKTAEMTGVPKDQLEQLAQLYADPNKKVISYWTMGFNQHTRGVWANNLVYNLHLLTGK 396
                    G+    L+    L+A  + + +S ++MG NQ  +GV     + N HL TG+
Sbjct: 271 --------CGLALADLQTFFDLFA-AHPRTVSLFSMGANQSAQGVAKGLAIINAHLATGR 321

Query: 397 ISQPGCGPFSLTGQPSACGTAREVGTFAHRLPADMVVTNEKHRDICEKKWNIPSGTIPAK 456
           I +PG  PFS+TGQP+A G  RE G  A+ L   M  + E+ RD   + W  P+ T  A 
Sbjct: 322 IGKPGACPFSITGQPNAMG-GRETGGMANTLAGHMDFSPEE-RDRVARFWGAPN-TARAP 378

Query: 457 IGLHAVAQDRALKDGKLNVYWTMCTNNMQAGPNINEERMPGWRDPRNFIIVSDPYPTVSA 516
            GL A+    A++DG++   W M TN   + P     R    R P  F++VSD   T + 
Sbjct: 379 -GLKAIDMFEAVRDGRIKALWVMATNPAVSLPASGAVREALERCP--FVVVSDCVETDTT 435

Query: 517 LAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKSDLWQLVQFSRRFKTEEV-W 575
             AD+ LP   W EK+G   N+ERR    R     PG+A++D   + + +R    +   W
Sbjct: 436 AFADVKLPALAWGEKDGTVTNSERRISRQRTLFPPPGQARADWRIIAEVARAMGFDGFGW 495

Query: 576 PEDLLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLNDESRELGFYLQKGLFEEYAW 635
           P      +                                 E   L  Y  KG       
Sbjct: 496 PHAASVFR---------------------------------EWARLTAYENKGRLLNLEG 522

Query: 636 FGRGHGHDLAPFDDYHKARGLRWPV-VNGKETQWRYSEGNDPYVKAGEGYKFYGKPDGKA 694
             R     L P   Y     ++WPV   G+     + +G             +   +G+A
Sbjct: 523 LTR-----LDP-QAYDALEPVQWPVDTEGRGRARLFEDGR------------FQTANGRA 564

Query: 695 VIFALPFEPAAEAPDEEYDLWLSTGRVLEHWHTGSMTRRVPELHRAFPEAVLFIHPLDAK 754
            +  +     AEA  +++ + L+TGR+ + WHT + T   P+L R  PE  + +HP DA+
Sbjct: 565 RLVPVRPRGPAEATSDKFPMALNTGRIRDQWHTMTRTGLAPDLCRHAPEPYVEVHPDDAR 624

Query: 755 ARDLRRGDKVKVVSRRGEVISIVETRGRNRPPQGLVYMPF-----FDAAQLVNKLTLDAT 809
           A  L  G   +V++ R E +++ +   R R  +G ++MP      F  A   N L    T
Sbjct: 625 AVGLTEGALARVMTTRAEAVAVAKLSDRQR--RGSLFMPMHWTDAFAPAGRANALVAPMT 682

Query: 810 DPLSKETDFKKCAVKL 825
           DP S + +FK    ++
Sbjct: 683 DPSSGQPEFKHTPARI 698