Pairwise Alignments

Query, 315 a.a., tRNA-dihydrouridine synthase C (NCBI) from Escherichia coli BW25113

Subject, 319 a.a., tRNA-dihydrouridine synthase C (EC 1.-.-.-) from Pseudomonas fluorescens FW300-N1B4

 Score =  257 bits (657), Expect = 2e-73
 Identities = 136/312 (43%), Positives = 197/312 (63%), Gaps = 6/312 (1%)

Query: 1   MRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTP 60
           M++ LAPMEG++D+++R++LT V   D C+TEF+R+ DQLL    +H+  PEL   +RT 
Sbjct: 1   MQIALAPMEGLVDNILRDVLTRVGGIDWCVTEFIRINDQLLTPAYYHKFGPELLTGARTA 60

Query: 61  SGTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIY 120
           SG  +RVQLLG  P  LAENAA A ELGS  +DLN GCP+KTVN S GGA LLK+PEL+ 
Sbjct: 61  SGVPLRVQLLGSDPVCLAENAALACELGSEVIDLNFGCPAKTVNKSRGGAVLLKEPELLN 120

Query: 121 QGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEH 180
           Q  + +R AVPAH+PV+ K+RLG+DS +     A A+ + GA  +VVH RTK  GY+   
Sbjct: 121 QIVEHVRRAVPAHIPVTAKMRLGFDSPDGALVCATALAEGGAAHIVVHARTKTDGYKPP- 179

Query: 181 IDWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVK-- 238
             W+ I  ++  + +PV ANG+IW  +  ++C  ISG + +M+GRG ++ P+L+R +   
Sbjct: 180 AHWEWIPRVQDVVKVPVFANGDIWSVEDWRRCREISGVEDIMLGRGLVSRPDLARQIAAA 239

Query: 239 ---YNEPRMPWPEVVALLQKYTRLEKQGDTGLYHVARIKQWLSYLRKEYDEATELFQHVR 295
               +   M W E++ L+Q +    K   T      R+KQWL+ L + Y EA ELF  +R
Sbjct: 240 RAGEDVVEMTWAELLPLIQDFWLQAKAQMTPRQSPGRLKQWLAMLTRNYPEAVELFTVLR 299

Query: 296 VLNNSPDIARAI 307
                 +++R +
Sbjct: 300 RETELDNVSRLL 311