Pairwise Alignments

Query, 315 a.a., tRNA-dihydrouridine synthase C (NCBI) from Escherichia coli BW25113

Subject, 323 a.a., tRNA-dihydrouridine synthase from Pseudomonas stutzeri RCH2

 Score =  251 bits (641), Expect = 2e-71
 Identities = 131/304 (43%), Positives = 193/304 (63%), Gaps = 6/304 (1%)

Query: 1   MRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTP 60
           M++ LAPMEG++D ++R++LT +   D C+TEF+RV D+LLP   F ++ PEL + + T 
Sbjct: 1   MQIALAPMEGLVDEILRDVLTRMGGVDWCVTEFIRVSDRLLPKSSFRKLAPELTSGAVTR 60

Query: 61  SGTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIY 120
           +GT VRVQLLG  P  LA+NAA A  LG+  +DLN GCP+KTVN S GGA LLK+PEL++
Sbjct: 61  AGTPVRVQLLGSDPVCLADNAAFACALGAPAIDLNFGCPAKTVNKSRGGAVLLKEPELLH 120

Query: 121 QGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEH 180
                +R AVPAH+PV+ K+RLG+DS +   + A A+   GA +LVVH RTK +GY+   
Sbjct: 121 AILCEVRRAVPAHVPVTAKMRLGFDSPDSAIDCARALVDGGAGQLVVHARTKVEGYKPP- 179

Query: 181 IDWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVK-- 238
             W+ I  +++ +++PV ANG+IW     Q+C  +SG + +M+GRG ++ P+L+R +   
Sbjct: 180 AHWEWIARVQEAVSVPVYANGDIWSLADWQRCREVSGAENIMLGRGLVSRPDLARQIAAA 239

Query: 239 ---YNEPRMPWPEVVALLQKYTRLEKQGDTGLYHVARIKQWLSYLRKEYDEATELFQHVR 295
               + P M W E    L  + +  +      Y   R+KQWL+ L + Y EA  LF  +R
Sbjct: 240 KQGLSLPEMSWAEFQPTLVDFWQQARGKIAPRYAPGRLKQWLALLTRNYPEAVALFAAMR 299

Query: 296 VLNN 299
             N+
Sbjct: 300 REND 303