Pairwise Alignments

Query, 315 a.a., tRNA-dihydrouridine synthase C (NCBI) from Escherichia coli BW25113

Subject, 333 a.a., tRNA dihydrouridine synthase DusB from Rhodopseudomonas palustris CGA009

 Score =  123 bits (309), Expect = 5e-33
 Identities = 81/230 (35%), Positives = 122/230 (53%), Gaps = 12/230 (5%)

Query: 3   VLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSG 62
           V LAPM G+ D   R  + E+    L ++E     D +   ++  R C ++         
Sbjct: 12  VFLAPMTGITDVPFRRQVAELGA-GLVVSEMTASEDLVAGRRMSVRRCDKVGQGPHV--- 67

Query: 63  TLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQG 122
               VQL G   +W+AE A  A   G+  +D+N GCP++ V G   G+ L++D +     
Sbjct: 68  ----VQLAGCEARWMAEGARIAEAGGADIIDINMGCPARHVTGGLSGSALMRDLDHALTL 123

Query: 123 AKAMREAVPAHLPVSVKVRLGWDSGEKKF-EIADAVQQAGATELVVHGRTKEQGYRAEHI 181
            +A   AV   +PV++K+RLGWD   +   E+A   Q AG   + VHGRT++Q Y+ E  
Sbjct: 124 IEATIGAV--RVPVTLKMRLGWDDRSRNAPELARRAQDAGVQLVTVHGRTRQQFYKGE-A 180

Query: 182 DWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIP 231
           DW A+  +R  ++IP++ NG+I    SA + +  SG DAVMIGRGA   P
Sbjct: 181 DWDAVRAVRDAISIPLVVNGDITCHASAVEALKRSGADAVMIGRGAQGRP 230