Pairwise Alignments

Query, 315 a.a., tRNA-dihydrouridine synthase C (NCBI) from Escherichia coli BW25113

Subject, 335 a.a., tRNA dihydrouridine synthase DusB from Pedobacter sp. GW460-11-11-14-LB5

 Score =  114 bits (285), Expect = 3e-30
 Identities = 79/240 (32%), Positives = 122/240 (50%), Gaps = 13/240 (5%)

Query: 3   VLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSG 62
           +LLAPME V D   R +  + N  D+  TEF+          +       +Q        
Sbjct: 15  LLLAPMEDVSDPPFRYVCKK-NGADMMYTEFISSEG------LIRDAAKSIQKLDIFEYE 67

Query: 63  TLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQG 122
             + +Q+ G     + E +  A   G   VD+N GCP K V   G G++LL+D + + + 
Sbjct: 68  RPIGIQIFGGDIDHMREASEIASAAGPDLVDINYGCPVKNVVCKGAGSSLLQDIDKMVKM 127

Query: 123 AKAMREAVPAHLPVSVKVRLGWDSGEKK-FEIADAVQQAGATELVVHGRTKEQGYRAEHI 181
            +A+ +A  +HLPV+VK RLGWD   K  +E+A+ +Q  G   L +HGRT+ Q Y+ E  
Sbjct: 128 TEAVVKA--SHLPVTVKTRLGWDDNTKNVYEVAERLQDVGIQALTIHGRTRAQLYKGE-A 184

Query: 182 DWQAIGDIRQ--RLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVKY 239
           DW  I +I++  R+ IP+  NG++   + A         D +MIGR A+  P + R VK+
Sbjct: 185 DWSLIREIKRNPRIKIPIFGNGDVDSPEKAANWRMEYEIDGIMIGRAAIGYPWIFREVKH 244