Pairwise Alignments

Query, 315 a.a., tRNA-dihydrouridine synthase C (NCBI) from Escherichia coli BW25113

Subject, 309 a.a., dihydrouridine synthase, DuS (RefSeq) from Shewanella loihica PV-4

 Score =  340 bits (873), Expect = 2e-98
 Identities = 172/309 (55%), Positives = 218/309 (70%), Gaps = 1/309 (0%)

Query: 1   MRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTP 60
           MRV+LAPMEGV D+ +R LLT V  YD+ I+EF+RVVDQLLP KVF+R+C EL+   RT 
Sbjct: 1   MRVILAPMEGVADAPMRALLTSVGGYDMVISEFIRVVDQLLPEKVFYRLCAELKYQCRTA 60

Query: 61  SGTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIY 120
           SGT VR+QLLGQ P W+AENA RAVELGS GVDLN GCP+  VN S GGA LLK+PE IY
Sbjct: 61  SGTPVRLQLLGQEPNWMAENAIRAVELGSRGVDLNYGCPAPMVNRSKGGAALLKEPETIY 120

Query: 121 QGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEH 180
           +  +A+R+AVP   PVS K+RLGWD   +  EIA A++ AGATEL VH RTKE+ YR   
Sbjct: 121 RVTQAVRQAVPKDKPVSAKIRLGWDDKSRCTEIAQAIEAAGATELTVHARTKEEAYRPP- 179

Query: 181 IDWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVKYN 240
             W+ I  I+    +P+IANGEIW  +   +C   SGCD VM+GRGAL IPNL+ VVK  
Sbjct: 180 AHWEYIAQIKSVTRLPIIANGEIWGREDYLKCREASGCDDVMLGRGALTIPNLAHVVKGE 239

Query: 241 EPRMPWPEVVALLQKYTRLEKQGDTGLYHVARIKQWLSYLRKEYDEATELFQHVRVLNNS 300
           +  MPWPEV+ALL +Y+  E   +   Y+ ARIKQWL ++ + Y+E   LF+ VRVL ++
Sbjct: 240 QTPMPWPEVLALLLQYSEFEIVSEKEKYYPARIKQWLRFIARHYEEGEALFRQVRVLKDT 299

Query: 301 PDIARAIQA 309
             I   +++
Sbjct: 300 QSILSLLRS 308