Pairwise Alignments

Query, 315 a.a., tRNA-dihydrouridine synthase C (NCBI) from Escherichia coli BW25113

Subject, 340 a.a., tRNA-dihydrouridine synthase C from Burkholderia phytofirmans PsJN

 Score =  248 bits (634), Expect = 1e-70
 Identities = 131/311 (42%), Positives = 192/311 (61%), Gaps = 5/311 (1%)

Query: 2   RVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPS 61
           R+ LAPMEG+ D ++R++LT +  +D C++EF+RV   +LP +V+ R  PE+ +A  TP+
Sbjct: 3   RLYLAPMEGLADYVLRDVLTGIGGFDGCVSEFIRVTGSVLPTRVYEREAPEVLDAGHTPN 62

Query: 62  GTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQ 121
           GT + VQLLG  P+W+A NAA A  L   GVDLN GCP+K VN  GGGA LL DPE + +
Sbjct: 63  GTPMVVQLLGSDPEWMALNAAHAATLSPHGVDLNFGCPAKVVNQHGGGAMLLADPEQLNR 122

Query: 122 GAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEHI 181
              A+R AVPA + V+ K+RLG        + A A+ + GA  LVVH RT++ GYR    
Sbjct: 123 IVSAVRAAVPADILVTAKMRLGVSDTSLAIDCATALAEGGAASLVVHARTRDHGYRPP-A 181

Query: 182 DWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVKYNE 241
            W+ I  I   +++PVIANGE+W     ++C A+SGCD VMIGRGA++ P L+  ++   
Sbjct: 182 HWEWIARIDAAVDVPVIANGEVWTVTDWERCRAVSGCDDVMIGRGAVSDPFLALRIRGLM 241

Query: 242 PRMP----WPEVVALLQKYTRLEKQGDTGLYHVARIKQWLSYLRKEYDEATELFQHVRVL 297
            R P    W +V+  +  Y R  +      +   R+K+WLSYL++ + +A EL   +R +
Sbjct: 242 DRSPSNEDWRDVLGHMAGYLRKLQARVASRHEHGRVKKWLSYLQRTWPQAAELHAAIRRV 301

Query: 298 NNSPDIARAIQ 308
            +S +I   I+
Sbjct: 302 QDSQEIQDVIE 312