Pairwise Alignments

Query, 308 a.a., predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 343 a.a., ABC transporter ATP-binding protein from Pseudomonas fluorescens FW300-N2C3

 Score =  225 bits (574), Expect = 1e-63
 Identities = 119/255 (46%), Positives = 169/255 (66%), Gaps = 4/255 (1%)

Query: 1   MIEFSHVSKLF--GAQKAVNDLNLNFQEGSFSVLIGTSGSGKSTTLKMINRLVEHDSGEI 58
           MI F  + K      + AV+DL L+ +EG   V +G SG GK+T L+MINRL   DSG I
Sbjct: 1   MIRFEAIKKTHKGSPRMAVSDLTLHVREGEICVFVGPSGCGKTTILRMINRLDTQDSGRI 60

Query: 59  RFAGEEIRSLPVLELRRRMGYAIQSIGLFPHWSVAQNIATVPQLQKWSRARIDDRIDELM 118
              G     L V+ LRR +G+ +QS  LFPH +VA+NI  VP+L  WS+ +I  R+ EL+
Sbjct: 61  CVNGVATDELDVVTLRRGIGFMMQSSALFPHQTVAENIGAVPRLLGWSKHKIRQRVSELI 120

Query: 119 ALLGLESNLRERYPHQLSGGQQQRVGVARALAADPQVLLMDEPFGALDPVTRGALQQEMT 178
           +L+GL+    +RYP+QLSGGQQ RV +ARALA+DP V+LMDEPF ALDPV R  LQ E+ 
Sbjct: 121 SLVGLQPEFLDRYPNQLSGGQQSRVALARALASDPPVVLMDEPFAALDPVIRERLQDELV 180

Query: 179 RIHRLLGRTIVLVTHDIDEALRLAEHLVLMD-HGEVVQQGNPLTMLTRPANDFVRQFFGR 237
            + R L +TI+LVTHD++EA+++ + + + +  G++ Q   P  +L  PA++FV+ F G+
Sbjct: 181 ALQRRLHKTIILVTHDMEEAIKIGDRIAIFEGEGKLAQFDTPHNILAHPASEFVKNFIGK 240

Query: 238 SELGVRLLSLRSVAD 252
             L ++ LSL  V+D
Sbjct: 241 DPL-LKRLSLMKVSD 254