Pairwise Alignments

Query, 308 a.a., predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 385 a.a., glycine/betaine ABC transporter ATP-binding protein from Pseudomonas fluorescens FW300-N2C3

 Score =  233 bits (594), Expect = 5e-66
 Identities = 130/310 (41%), Positives = 188/310 (60%), Gaps = 13/310 (4%)

Query: 1   MIEFSHVSKLFGAQ----KAVNDLNLNFQEGSFSVLIGTSGSGKSTTLKMINRLVEHDSG 56
           MIE  ++SK F +     KAV+ +NL   EG   V +G SG GKSTTLKMINRL+   SG
Sbjct: 1   MIELQNLSKTFKSNGKDVKAVDSVNLIVNEGEICVFLGPSGCGKSTTLKMINRLIPPTSG 60

Query: 57  EIRFAGEEIRSLPVLELRRRMGYAIQSIGLFPHWSVAQNIATVPQLQKWSRARIDDRIDE 116
           ++   GE+   L  + LRR +GY IQ IGLFP+ ++ +NI  VP+L  W + +  DR  E
Sbjct: 61  KVLINGEDTTDLDEVTLRRNIGYVIQQIGLFPNMTIEENITVVPRLLGWDKQKCHDRARE 120

Query: 117 LMALLGLE-SNLRERYPHQLSGGQQQRVGVARALAADPQVLLMDEPFGALDPVTRGALQQ 175
           LM+++ LE      RYP +LSGGQQQR+GV RALAAD  +LLMDEPFGA+DP+ R  +Q 
Sbjct: 121 LMSMIKLEPKQYLHRYPRELSGGQQQRIGVIRALAADAPLLLMDEPFGAVDPINREMIQN 180

Query: 176 EMTRIHRLLGRTIVLVTHDIDEALRLAEHLVLMDHGEVVQQGNPLTMLTRPANDFVRQFF 235
           E   + R L +T+++V+HDIDEA++L + + +   G++VQ  +P T+L  PA++FV  F 
Sbjct: 181 EFFEMQRALNKTVIMVSHDIDEAIKLGDKIAIFRAGKLVQCDHPDTLLAHPADEFVSSFV 240

Query: 236 GRSELGVRLLSLRSVADYVRREERAD-GEALAEEMTLRDALSLFVARGCEVLPVVNMQGQ 294
           G+     RLL        V+ E+ AD   +++ E  + +AL L        + V   + +
Sbjct: 241 GQDSTLKRLL-------LVKAEDAADNAPSVSPETPVNEALELMDEHDRRYVVVTCAENK 293

Query: 295 PCGTLHFQDL 304
             G +  +DL
Sbjct: 294 ALGYVRRRDL 303