Pairwise Alignments

Query, 248 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 252 a.a., ligand-binding UTRA domain-containing protein from Phaeobacter inhibens DSM 17395

 Score =  104 bits (259), Expect = 2e-27
 Identities = 67/230 (29%), Positives = 124/230 (53%), Gaps = 7/230 (3%)

Query: 23  PLYIKFAETVKNAVRSGVLEHGNILPGERDLSQLTGVSRITVRKAMQALEEEGVVTRSRG 82
           P Y++  + +++ + +G+L     LP ER+++ LTG+SR+TVR+AMQ L + G+V + +G
Sbjct: 19  PRYVRLRQRIEDGIETGLLPKSAPLPAEREIATLTGLSRVTVRRAMQDLVDRGIVVQRQG 78

Query: 83  YGTQINN---IFEYSLKEARGFSQQVVLRGKKPDTLWVNKRV-VKCPEEVAQQLAVEAGS 138
            G+ + +     E SL +   F++ +  RG      W+ + +    PEEV   LA+ +G 
Sbjct: 79  SGSFVADGTPKVEQSLSQLTSFTEDMERRGYDTSVEWLERGIHTPSPEEV-MALALTSGE 137

Query: 139 DVFLLKRIRYVDEEAVSIEESWVPAHLIHDVDAIGISLYDYFRSQHIYPQRTRSRVSA-R 197
            V  + R+R  +   ++IE + +P  ++ +  A+  SLY+        P R   R+SA  
Sbjct: 138 AVARIARLRRANGRPMAIERASLPVDILPNPQAVRGSLYEVLEQSGSRPVRALQRISAIN 197

Query: 198 MPDAEFQSHIQLDSKIPVLVIKQVALDQQQRPIEYSISHCRSDLYVFVCE 247
           +P+ E Q  + ++  +  L I + +  + +R +E++ S  R D Y FV E
Sbjct: 198 LPEQEAQM-LGVEPGMAGLSIVRTSYLRNRRVVEFTRSIYRGDAYDFVAE 246