Pairwise Alignments

Query, 248 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 244 a.a., transcriptional regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 78.2 bits (191), Expect = 1e-19
 Identities = 59/238 (24%), Positives = 114/238 (47%), Gaps = 5/238 (2%)

Query: 15  RILAADNT--PLYIKFAETVKNAVRSGVLEHGNILPGERDLSQLTGVSRITVRKAMQALE 72
           +IL   N+  PLY++  E ++  ++    + G +LP E DLS+  G+SR T+R+A+  L 
Sbjct: 2   KILVNHNSAIPLYLQIEEQLRTIIKGEEYKQGKMLPNEIDLSKQLGISRNTLRQAINNLV 61

Query: 73  EEGVVTRSRGYGT-QINNIFEYSLKEARGFSQQVVLRGKKPDTLWVNKRVVKCPEEVAQQ 131
            EG++ R +G GT  +N+      +    F+Q++   G  P    ++    K  +++A  
Sbjct: 62  NEGLLMRKKGVGTVVVNSAVCSKAQNWMSFTQEMKTLGIVPMNYELHVSWTKPTDDIALF 121

Query: 132 LAVEAGSDVFLLKRIRYVDE-EAVSIEESWVPAHLIHDVDAIGISLYDYF-RSQHIYPQR 189
                   +  L+R+R   E   V     + P   +   +     LY+   R  H   + 
Sbjct: 122 FNAPDVKRILKLERLRGNQEYPFVYFISYFNPKIGLTGSEDFSRPLYEILERDYHAIAKV 181

Query: 190 TRSRVSARMPDAEFQSHIQLDSKIPVLVIKQVALDQQQRPIEYSISHCRSDLYVFVCE 247
           ++  +SAR+ D      +++    P+LV K+   D +  P+E++I + R+D +++  E
Sbjct: 182 SKEDISARLADKYIAGKLEIKVGDPILVRKRFVYDPEGCPLEWNIGYYRADSFIYSLE 239