Pairwise Alignments

Query, 228 a.a., flagellar biosynthesis; export of flagellar proteins? (VIMSS) from Escherichia coli BW25113

Subject, 285 a.a., flagellar assembly protein FliH from Cupriavidus basilensis FW507-4G11

 Score =  133 bits (335), Expect = 3e-36
 Identities = 76/221 (34%), Positives = 117/221 (52%), Gaps = 22/221 (9%)

Query: 7   WKTWT-----PDDLAPPQAEFVPIVEPEETIIEEAEPSLE-QQLAQLQMQAHEQGYQAGI 60
           W+ W      P   AP  AEF+P+        E A P ++   L  ++  A ++GY  G 
Sbjct: 68  WQRWQMVSLDPRKAAPAPAEFMPL--------EPAPPPIDFAALDAMREGARKEGYAQGY 119

Query: 61  AEGRQQGHKQGYQEGLAQGLEQGLAEAKSQQAPIHARMQQLVSEFQTTLDALDSVIASRL 120
            +G+ QG+  G++EG A+GLE    EA        A +QQL + F   L  +D  +A  L
Sbjct: 120 TQGQTQGYGDGHREGYARGLEGARTEA--------AHLQQLAATFSHALGRVDEEVAQTL 171

Query: 121 MQMALEAARQVIGQTPTVDNSALIKQIQQLLQQEPLFSGKPQLRVHPDDLQRVDDMLGAT 180
           + +AL+ ARQ++ Q    D + L+  +++LL  EP  SG P L ++PDD+  V+  L   
Sbjct: 172 ISLALDVARQLVQQAVQADPAVLLPAVRELLAAEPALSGSPCLLLNPDDVTLVETHLTGE 231

Query: 181 LSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQELCR 221
           L   GW +R D  +  GGC  SA  G+LDA+++TRW  + +
Sbjct: 232 LQAAGWSVRADAAIARGGCVASAASGELDATLSTRWSRVVK 272