Pairwise Alignments

Query, 228 a.a., flagellar biosynthesis; export of flagellar proteins? (VIMSS) from Escherichia coli BW25113

Subject, 204 a.a., type III secretion system stator protein SctL from Ralstonia sp. UNC404CL21Col

 Score = 54.3 bits (129), Expect = 2e-12
 Identities = 52/193 (26%), Positives = 78/193 (40%), Gaps = 34/193 (17%)

Query: 27  EPEETIIEEAEPSLEQQLAQLQMQAHEQGYQAGIAEGRQQGHKQGYQEGLAQGLEQGLAE 86
           E E T + +AE  L    AQ   + HE   +   AE RQ G+  G+Q G           
Sbjct: 23  EREYTALLDAEALLGA--AQADRKRHETEAKRQYAEQRQLGYDDGFQAG----------- 69

Query: 87  AKSQQAPIHARMQQLVSEFQTTLDALDSVIASR--LMQMALEAARQVIGQT-PTVDNSAL 143
                     R +   S + T L A   + A+R  + ++ + A  +++    P     + 
Sbjct: 70  ----------RTEAAQSTYATVLQAAAMLQATRGKMAELVVRAVSEIVADADPRAIMLSA 119

Query: 144 IKQIQQLLQQEPLFSGKPQLRVHPDDLQRVDDMLGAT----LSLHGWRLRGDPTLHPGGC 199
            K+I Q LQ E        +RVHP  +  + ++L A     L     R+ GDP L  G C
Sbjct: 120 AKRIAQYLQDETYL----HIRVHPGRVHMMQEVLAALPGDHLERRTIRVTGDPALRYGDC 175

Query: 200 KVSADEGDLDASV 212
            V    G +DA V
Sbjct: 176 SVQTPSGTIDAGV 188