Pairwise Alignments

Query, 552 a.a., flagellar M-ring protein (NCBI) from Escherichia coli BW25113

Subject, 580 a.a., flagellar basal body M-ring protein FliF from Vibrio cholerae E7946 ATCC 55056

 Score =  211 bits (536), Expect = 8e-59
 Identities = 165/551 (29%), Positives = 269/551 (48%), Gaps = 49/551 (8%)

Query: 22  KIPLIVAGSAAVAVMVALILWAKAPDYRTLFSNLSDQDGGAIVSQLTQMNIPYRFSEASG 81
           ++ L+++ S  VA++V L  W + PD R L +    ++   ++  L Q    Y+      
Sbjct: 55  QVVLVLSISICVALIVMLFFWVREPDMRPLGA-YETEELIPVLDYLDQQKQQYKLD--GN 111

Query: 82  AIEVPADKVHELRLRLAQQGLPKGGAVGFELLDQEK-FGISQFSEQVNYQRALEGELSRT 140
            I VP    + L+L + + GL +    G E+L Q+  FG+SQ  EQ   + + E +L++ 
Sbjct: 112 TILVPVSDYNSLKLSMVRAGLNQNRQAGDEILMQDMGFGVSQRLEQERLKLSRERQLAKA 171

Query: 141 IETIGPVKGARVHLAMPKPSLFVREQKSPSASVTVNLLPGRALDEGQISAIVHLVSSAVA 200
           IE +  V  ARV LA+PK S+FVR  +  SASV + +  G  L + +I A+V +V+SAV 
Sbjct: 172 IEEMRQVNKARVLLALPKQSVFVRHNQEASASVFLTVRTGANLKQEEIDAVVDMVASAVP 231

Query: 201 GLPPGNVTLVDQGGHLL---TQSNTSGRDLNDAQLKYASDVEGRIQRRIEAILSPIVGNG 257
           G+ P  VT+ DQ G LL   +Q   S     + +L+     E  ++ +I+++L PI+G G
Sbjct: 232 GMKPSRVTVTDQHGRLLSSGSQDPVSAARRKEQELE--KQQEEALRGKIDSVLIPILGLG 289

Query: 258 NIHAQVTAQLDFASKEQTEEQYRPNGDESHAALRSRQLNESEQSGSGYPGGVPGALSNQP 317
           N  AQV  +LDF++ EQT + + PN      A RS    E   +G+    GVPGALSNQ 
Sbjct: 290 NYTAQVDIELDFSAVEQTRKVFDPN----TPATRSEYTLEDYNNGN-VVAGVPGALSNQ- 343

Query: 318 APANNAPISTPPANQNNRQQQASTTSNS--GPRSTQRNETSNYEVDRTIRHTKMNVGDVQ 375
                     PPA+ +  Q  A     S  G  S  +  T NYE+D TI H +   G + 
Sbjct: 344 ----------PPADASIPQDVAQMKDGSVMGQGSVHKEATRNYELDTTISHERKQSGVIN 393

Query: 376 RLSVAVVVNYKTL--PDGKPL---PLSNEQMKQIEDLTREAMGFSEKRGDSLNVVNSPFN 430
           R +VAV V  ++   PD   +   PLS   +  I  +    +G+SE RGD LNV++ PF 
Sbjct: 394 RQTVAVAVKSRSSVNPDTGEVTYTPLSEADLNSIRQVLIGTVGYSENRGDLLNVLSMPFA 453

Query: 431 SSD-ESGGELPFWQQQAFIDQLLAAGRWLLVLLVAWLLWRKAVRPQLTRRAE-------- 481
             + E   ++P W+   F D +      L++++V  +L R A++  +   A+        
Sbjct: 454 EPEMEQIVDVPIWEHPNFNDWVRWFASALVIIIVILVLVRPAMKKLINPAADNDDQMYGP 513

Query: 482 ---AMKAVQQQAQAREEVEDAVEVRLSKDEQLQQRRANQRLGAEVMSQRIREMSDNDPRV 538
               + A  + +    +++            L     +     E + + +R +  N+P +
Sbjct: 514 DGMPIGADGETSLIGSDIDGGELFEFGSGIDLPNLHKD-----EDVLKAVRALVANEPEL 568

Query: 539 VALVIRQWINN 549
            A V++ W+ N
Sbjct: 569 AAQVVKNWMQN 579