Pairwise Alignments

Query, 552 a.a., flagellar M-ring protein (NCBI) from Escherichia coli BW25113

Subject, 538 a.a., flagellar basal-body MS-ring/collar protein FliF from Rhodopseudomonas palustris CGA009

 Score =  246 bits (627), Expect = 2e-69
 Identities = 183/561 (32%), Positives = 278/561 (49%), Gaps = 56/561 (9%)

Query: 11  LEWLNRLRANPKIPLIVAGSAAVAVMVALILWAKAPDYRTLFSNLSDQDGGAIVSQLTQM 70
           L +L  L A   + +I    A V     +I+    P   TL+++LS +D  +I+ +L + 
Sbjct: 5   LGFLKGLGAARLMAMIAVTVALVGFFAFVIMRVSQPQMTTLYTDLSVEDSSSIIKELERQ 64

Query: 71  NIPYRFSEASGAIEVPADKVHELRLRLAQQGLPKGGAVGFELLDQ-EKFGISQFSEQVNY 129
            IP+        + VP DKV  LR++LA+ GLPKGG VG+E+ D+ +  G + F + +N+
Sbjct: 65  GIPFEMRNDGAILLVPKDKVTRLRMKLAEGGLPKGGGVGYEIFDKSDALGTTSFVQNINH 124

Query: 130 QRALEGELSRTIETIGPVKGARVHLAMPKPSLFVREQKSPSASVTVNLLPGRALDEGQIS 189
            RALEGELSRTI  I  V+ ARVHL +P+  LF RE   PSAS+ + +    AL+  Q+ 
Sbjct: 125 LRALEGELSRTIRAIDRVQAARVHLVLPERPLFSREAPEPSASIVLRV--RGALEPQQVR 182

Query: 190 AIVHLVSSAVAGLPPGNVTLVDQGGHLLTQSNTSGRDLNDAQL-KYASDVEGRIQRRIEA 248
           AI HLV+SAV GL P  V++VD+ G LL   + SG  +  A   +  +  E R++ +IE 
Sbjct: 183 AIRHLVASAVNGLKPQRVSIVDEAGQLLADGSASGEQVEGATSDERRAAFEKRMRNQIEG 242

Query: 249 ILSPIVGNGNIHAQVTAQLDFASKEQTEEQYRPNGDESHAALRSRQLNESEQSGSGYPGG 308
           I+S +VG+G    QV+A  D+    QT +++ P G      LRS Q  E   + S   G 
Sbjct: 243 IVSSVVGSGRARVQVSADFDYNKITQTSDKFDPEG----RVLRSSQTREESAATSAADGQ 298

Query: 309 VPGALSNQPAPANNAPISTPPANQNNRQQQASTTSNSGPR--STQRNETSNYEVDRTIRH 366
           V           NN     P ANQ            +G R  S +  ET+NYE+ R  + 
Sbjct: 299 V---------TVNN---ELPGANQG---------QGAGARDVSKKSEETNNYEISRVTKT 337

Query: 367 TKMNVGDVQRLSVAVVVNYKTLPDGKP----LPLSNEQMKQIEDLTREAMGFSEKRGDSL 422
                G V RLSVAV+V+     + K          EQ+ +I  L R A+GF +KRGD +
Sbjct: 338 EVTEAGRVNRLSVAVLVDGAYTKNDKGELVYAERPKEQLDRIAALVRSAIGFDQKRGDQI 397

Query: 423 NVVNSPFNSS------DESGGELPFWQ--QQAFIDQLLAAGRWLLVLLVAWLLWRKAVRP 474
            VVN  F  +       E  G +  +Q  +   ++ +     +LL L+V +++    +RP
Sbjct: 398 EVVNLKFAEAPQVEKLPEPAGLMGMFQFTKDDIMNMIQLGVMFLLGLVVLFMV----IRP 453

Query: 475 QLTRRAEAMKAVQQQAQAREEVEDAVEVRLSKDEQLQQRRANQRLG-AEVMSQ------- 526
            L +R  A +   + A     + D    ++  D Q         +  A+V  Q       
Sbjct: 454 -LVKRILAAEPAPEAAGGLPALADGTVPQIGADGQPVPASVPSMIDIAQVQGQVHAQSVH 512

Query: 527 RIREMSDNDPRVVALVIRQWI 547
           R+ E+++ +P   A +IRQW+
Sbjct: 513 RVGELAERNPNETAAIIRQWL 533