Pairwise Alignments

Query, 552 a.a., flagellar M-ring protein (NCBI) from Escherichia coli BW25113

Subject, 593 a.a., flagellar M-ring protein FliF from Herbaspirillum seropedicae SmR1

 Score =  449 bits (1155), Expect = e-130
 Identities = 254/557 (45%), Positives = 366/557 (65%), Gaps = 37/557 (6%)

Query: 22  KIPLIVAGSAAVAVMVALILWAKAPDYRTLFSNLSDQDGGAIVSQLTQMNIPYRFSEASG 81
           +I LI+A +A +AVM  + LW++  +YR LFSN +D+DGGAIV+ L QMN+PY++S+   
Sbjct: 46  RILLIIAAAATLAVMAGIWLWSQKVEYRVLFSNFNDRDGGAIVASLQQMNVPYKYSDGGT 105

Query: 82  AIEVPADKVHELRLRLAQQGLPKGGAVGFELLDQEKFGISQFSEQVNYQRALEGELSRTI 141
           AI VP + VH+ RL+LA QGLPKGG VGFEL++ +K GISQF EQVN+QRALEGEL+R++
Sbjct: 106 AILVPENMVHDARLKLAAQGLPKGGNVGFELMENQKLGISQFLEQVNFQRALEGELARSV 165

Query: 142 ETIGPVKGARVHLAMPKPSLFVREQKSPSASVTVNLLPGRALDEGQISAIVHLVSSAVAG 201
            ++  V+ ARVHLA+PK S+FVR+Q+ P+ASV ++L PGR LD  Q+SAIVHLV+S+V  
Sbjct: 166 GSLASVQTARVHLALPKASVFVRDQQKPTASVVLSLYPGRYLDPQQVSAIVHLVASSVPE 225

Query: 202 LPPGNVTLVDQGGHLL--TQSNTSGRDLNDAQLKYASDVEGRIQRRIEAILSPIVGNGNI 259
           L P  VT+VDQ G+LL  T        L+  QLKY  D++  I +R+E+I++PIVGNGN+
Sbjct: 226 LSPKAVTIVDQNGNLLSDTTKQAQPNTLDPTQLKYVQDMQQDIVKRVESIIAPIVGNGNV 285

Query: 260 HAQVTAQLDFASKEQTEEQYRPNGDESHAALRSRQLNESEQSGSGYPGGVPGALSNQPAP 319
            A+ TA +DF+  EQ  E Y+PN  +  AA+RS+Q +E+  + +G   GVPGALSNQP  
Sbjct: 286 RAEATADVDFSRSEQASEAYKPNQTKDSAAVRSKQSSEANSASNG-TSGVPGALSNQPPA 344

Query: 320 ANNAPISTPP-ANQNNRQQQASTTSNSGPRST-----QRNETSNYEVDRTIRHTKMNVGD 373
              API  P  AN    Q  A+T + + P  T     +++ET NYEVD+T+R+T+  +G 
Sbjct: 345 PATAPIVNPAVANGAANQTGAATPNGALPTPTATGNSRKDETINYEVDKTVRYTQQPMGG 404

Query: 374 VQRLSVAVVVNYKTLPD--GKPL--PLSNEQMKQIEDLTREAMGFSEKRGDSLNVVNSPF 429
           V+RL+VAVVVNYK   D  GK +  PL+  +  QI DL +EAMG+++ RGDSLNVVN+ F
Sbjct: 405 VRRLTVAVVVNYKRTMDNTGKIVMRPLTEAERNQITDLVKEAMGYNKDRGDSLNVVNTQF 464

Query: 430 NSSDESGGELPFWQQQAFIDQLLAAGRWLLVLLVAWLLWRKAVRP---QLTRRAEAMKAV 486
           ++  E   E+P W+Q   ID     G+++LV  V   L+ + +RP   +L+ R E  +  
Sbjct: 465 STDMEP--EVPLWKQPGMIDLAKEIGKYVLVAAVLLFLYFRVLRPIVWKLSGREERERLA 522

Query: 487 QQQAQAR-------------EEVEDAVEVRLSKDEQLQQRRANQRLGAEVMSQRIREMSD 533
           +++A+A               +  DA+ V LS + ++ + RA  +   E   Q     + 
Sbjct: 523 KEKAEAEAAAAAAAVAAGFDPDDPDAI-VNLSGESEVDE-RAQYKANLETAKQ----WAK 576

Query: 534 NDPRVVALVIRQWINND 550
           NDP++VA +I+ W+NN+
Sbjct: 577 NDPKLVASIIKSWVNNE 593