Pairwise Alignments

Query, 552 a.a., flagellar M-ring protein (NCBI) from Escherichia coli BW25113

Subject, 273 a.a., type III secretion system inner membrane ring lipoprotein SctJ from Ralstonia sp. UNC404CL21Col

 Score = 50.1 bits (118), Expect = 1e-10
 Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 5/172 (2%)

Query: 49  RTLFSNLSDQDGGAIVSQLTQMNIPYR---FSEASGAIEVPADKVHELRLRLAQQGLPKG 105
           + L SNL +     ++S L+   I  R     E    + V    + +    L  QGLP+ 
Sbjct: 30  KELVSNLGEPQANEVLSALSNAGIGARKEAVDEHGWQVLVDDSDMGQALDVLRAQGLPRE 89

Query: 106 GAVGF-ELLDQEKFGISQFSEQVNYQRALEGELSRTIETIGPVKGARVHLAMPKPSLFVR 164
                 E+  ++    +   E+V Y   +  ELSRT++ +  V  ARVH+ +P+      
Sbjct: 90  PLARLGEIFRKQGLVATPAEERVRYLYGMSEELSRTLQAMDGVVTARVHVVIPENDPLSD 149

Query: 165 EQKSPSASVTVNLLPGRALDEGQISAIVHLVSSAVAGLPPGNVTLVDQGGHL 216
           + +  SA+V +    G  L       +  LV+ ++ GL   NV+LV QG  L
Sbjct: 150 KVRPSSAAVYIKYRDGVNL-RAMTPMVKDLVAHSIEGLNYDNVSLVLQGTDL 200