Pairwise Alignments

Query, 552 a.a., flagellar M-ring protein (NCBI) from Escherichia coli BW25113

Subject, 273 a.a., type III secretion apparatus lipoprotein, YscJ/HrcJ family from Paraburkholderia bryophila 376MFSha3.1

 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 66/258 (25%), Positives = 106/258 (41%), Gaps = 30/258 (11%)

Query: 30  SAAVAVMVALILWAKAPDYRTLFSNLSDQDGGAIVSQLTQMNIPYRFSEASG----AIEV 85
           +A V + VA  L A     + L+ NLS+QD   +   L +  +    + A G    +++V
Sbjct: 20  AAMVVLCVACALLAGCK--KELYGNLSEQDVNEMTVALLERGVSAEKTTADGGKTYSLQV 77

Query: 86  PADKVHELRLRLAQQGLP--KGGAVGFELLDQEKFGISQFSEQVNYQRALEGELSRTIET 143
             D +      L   GLP  K   +G  L  ++    +   E+V +   L  ELS T+  
Sbjct: 78  SDDDMVRAMEVLRDNGLPHNKFDDLG-NLFKKDGLVSTPTEERVRFIYGLSQELSGTLSR 136

Query: 144 IGPVKGARVHLAMPKPSLFVREQKSPSASVTVNLLPGRALDEGQISAIVHLVSSAVAGLP 203
           I  V  ARV + +P      ++ K  SASV +   PG AL+   +  I +LV  +V GL 
Sbjct: 137 IDGVLVARVQIVIPNNDPLAQQVKPSSASVFIKYRPGLALN-SLVPQIKNLVVHSVEGLS 195

Query: 204 PGNVTLVDQGGHLLTQSNTSGRDLNDAQLKYASDVEGRIQRRIEAILSPIVGNGNIHAQV 263
                          Q + +G   +   L   SD  G +   + A L  +V        V
Sbjct: 196 -------------YEQVSVTGVAADQVDLSRRSDTHGSVWPWVAAGLLVVV-------LV 235

Query: 264 TAQLDFASKEQTEEQYRP 281
              L FA ++  + ++ P
Sbjct: 236 GLALGFAFRDALQRRFGP 253