Pairwise Alignments

Query, 682 a.a., carboxy-terminal protease for penicillin-binding protein 3 (NCBI) from Escherichia coli BW25113

Subject, 447 a.a., putative carboxy-terminal-processing protease from Phaeobacter inhibens DSM 17395

 Score =  150 bits (379), Expect = 1e-40
 Identities = 117/415 (28%), Positives = 198/415 (47%), Gaps = 48/415 (11%)

Query: 196 KFAIRRLAQTNSEDVFSLAMTAFAREIDPHTNYLSPRNTEQFNTEMSLSLEGIGAVLQMD 255
           +  ++ +   +  ++   A+      +DPH++YLSP +      +      G+G  +  +
Sbjct: 50  RIRVQYVEDVDETELIEAAIGGMLASLDPHSSYLSPDDAANMRVQTRGEFGGLGIEVTQE 109

Query: 256 DDYTVINSMVAGGPAAKSKAISVGDKIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKV 315
           + +  + S + G PA ++  +  GD I  V         V+G  LD+ V L++GP GS++
Sbjct: 110 EGFVKVVSPIDGTPADEA-GMESGDFITHVDGES-----VLGLALDEAVDLMRGPVGSEI 163

Query: 316 RLEILPAGKGTK------TRTVTLTRERIRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGL 369
            + ++  G+           T+ LT  R R ED  V + + T   +       P    GL
Sbjct: 164 VITVVREGEAEPFDVSIIRDTIKLTAVRARTEDETVVLRLTTFNDQTT-----PNLEAGL 218

Query: 370 TDDVKVQLQKLE-KQNVSSVIIDLRSNGGGALTEAVSLSGLFIPAGPIVQVRDNNGKVRE 428
               K QL++     NV+ +I+DLR+N GG LT+A+ ++  F+ +G IV  R  N +  E
Sbjct: 219 ----KKQLEEAGGMDNVNGIILDLRNNPGGLLTQAIKVADSFLDSGEIVSTRGRNPEDGE 274

Query: 429 DSD-TDGQVFYKGPLVVLVDRFSASASEIFAAAMQDYGRALVVGEPTFGKGTVQQYRSLN 487
             + T G +    P+VVL++  SASASEI A A+QD+ RA+VVG  +FGKG+VQ    L 
Sbjct: 275 RFNATPGDLVDGKPIVVLINGGSASASEIVAGALQDHRRAIVVGTKSFGKGSVQTVMPLK 334

Query: 488 RIYDQMLRPEWPALGSVQYTIQKFYRVNGGSTQRKGVTPDIIMPTGNEETETGEKFEDNA 547
                         G+++ T  ++Y  +G S Q  GV+PDI++     +    E+ E+ +
Sbjct: 335 ------------GDGAMRLTTARYYTPSGRSIQALGVSPDIVVEQPRRDPNAEEEEENTS 382

Query: 548 LPWDSIDAATYVKSGDLTAFEPELLKEHNARIAKDPEFQNIMKDIARFNAMKDKR 602
                  AA   +S      E +L    N     + E + I +D A+  A  ++R
Sbjct: 383 -------AARRTRS------EADLRGRLNNDSLSEDEIRQIEEDRAKAEAAAERR 424