Pairwise Alignments

Query, 682 a.a., carboxy-terminal protease for penicillin-binding protein 3 (NCBI) from Escherichia coli BW25113

Subject, 681 a.a., carboxy-terminal protease (RefSeq) from Shewanella loihica PV-4

 Score =  692 bits (1787), Expect = 0.0
 Identities = 374/677 (55%), Positives = 461/677 (68%), Gaps = 20/677 (2%)

Query: 7   LTALAGLLAIAGQTFAVEDITRADQIPVLKEETQHATVSERVTSRFTRSHYRQFDLDQAF 66
           L A    + +    +A+     + ++P L +E QH   S+RVT  FTR+HY +FDLD AF
Sbjct: 6   LAASIASIFVGFSAWALTPSIPSSELPSLTQEPQHKVASKRVTGLFTRAHYHRFDLDDAF 65

Query: 67  SAKIFDRYLNLLDYSHNVLLASDVEQFAKKKTELGDELRSGKLDVFYDLYNLAQKRRFER 126
           S ++FDRYL  LDY  NVLL SD++ F    T+  D L+SG L   Y +++L Q+RR++R
Sbjct: 66  SEQVFDRYLKQLDYRRNVLLQSDIDSFKPYATQFDDMLKSGDLTAAYKMFDLVQQRRYDR 125

Query: 127 YQYALSVLEKPMDFT-GNDTYNLDRSKAPWPKNEAELNALWDSKVKFDELSLKLTGKTDK 185
           + YALS+L+K MDF    D+Y  DR  A WPK+EAELN LW  +VK+D L+LKLTGK   
Sbjct: 126 FAYALSLLDKEMDFNVPGDSYQYDRDDAAWPKDEAELNELWRQRVKYDALNLKLTGKNWD 185

Query: 186 EIRETLTRRYKFAIRRLAQTNSEDVFSLAMTAFAREIDPHTNYLSPRNTEQFNTEMSLSL 245
           EI + L +RY  AI+RL+QT SEDVF   M AF+R ++PHT+YLSPRN E+F  EM+LSL
Sbjct: 186 EIVKVLDKRYNNAIKRLSQTKSEDVFQGVMNAFSRSVEPHTSYLSPRNAERFQMEMNLSL 245

Query: 246 EGIGAVLQMDDDYTVINSMVAGGPAAKSKAISVGDKIVGVGQTGKPMVDVIGWRLDDVVA 305
           EGIGAVLQMDDDYTVI S+VAGGPAA S+ ++  D+IVGVGQ GK +VDVIGWRLDDVV 
Sbjct: 246 EGIGAVLQMDDDYTVIKSLVAGGPAANSEKLAPEDRIVGVGQEGKEIVDVIGWRLDDVVE 305

Query: 306 LIKGPKGSKVRLEILP--AGKGTKTRTVTLTRERIRLEDRA-----VKMSVKTVGKEKVG 358
           LIKGPKGSKV L+ILP   G   K   VT+ R++IRLEDRA     ++         KVG
Sbjct: 306 LIKGPKGSKVVLQILPKKGGSSAKPIDVTIVRDKIRLEDRAATSEVIEPETGDYAGRKVG 365

Query: 359 VLDIPGFYVGLTDDVKVQLQKLEKQNVSSVIIDLRSNGGGALTEAVSLSGLFIPAGPIVQ 418
           V+ IPGFY+ L+ DV  +L KL+   V  V+IDLR NGGGALTEA  L+GLFI  GP+VQ
Sbjct: 366 VIKIPGFYMNLSQDVTKELVKLKDAKVEGVVIDLRGNGGGALTEATLLTGLFIEQGPVVQ 425

Query: 419 VRDNNGKVREDSDTDGQVFYKGPLVVLVDRFSASASEIFAAAMQDYGRALVVGEPTFGKG 478
           +RD NGKV ++ D DG+V Y GPL V+VDR+SASASEIFAAA+QDY RAL+VGE TFGKG
Sbjct: 426 IRDANGKVSQNRDNDGRVTYSGPLTVMVDRYSASASEIFAAALQDYDRALIVGESTFGKG 485

Query: 479 TVQQYRSLNRIYDQMLRPEWPALGSVQYTIQKFYRVNGGSTQRKGVTPDIIMPTGNEETE 538
           TVQQ++SL RIYD   +P    +G VQYTI KFYR+NGGSTQ KGVTPDI  P+  E  E
Sbjct: 486 TVQQHKSLGRIYDMYDKP----IGHVQYTIAKFYRINGGSTQLKGVTPDIPFPSALEPGE 541

Query: 539 TGEKFEDNALPWDSIDAATYVKSGDLTAFEPELL----KEHNARIAKDPEFQNIMKDIAR 594
            GE  E NALPWD +  A Y   GD+T   PEL+      H  RI KD EF  I +DIA 
Sbjct: 542 YGEAEEANALPWDKVPVAQYGTLGDIT---PELVTNLDSRHQQRIKKDVEFGYIDQDIAE 598

Query: 595 FNAMKDKRNIVSLNYAVREKENNEDDATRLARLNERFKREGKPELKKLDDLPKDYQEPDP 654
           F     K   VSL    R  E   +D  +LARLNER   +G   LK LDD  +D + PD 
Sbjct: 599 FK-KSHKETSVSLVEKERVAEREANDEKQLARLNERRAVDGLEALKSLDDAEEDVKAPDA 657

Query: 655 YLDETVNIALDLAKLEK 671
           +LDETV I LDL  +E+
Sbjct: 658 FLDETVYITLDLVDMER 674