Pairwise Alignments

Query, 682 a.a., carboxy-terminal protease for penicillin-binding protein 3 (NCBI) from Escherichia coli BW25113

Subject, 707 a.a., periplasmic tail-specific proteinase from Marinobacter adhaerens HP15

 Score =  467 bits (1201), Expect = e-135
 Identities = 266/619 (42%), Positives = 370/619 (59%), Gaps = 37/619 (5%)

Query: 55  SHYRQFDLDQAFSAKIFDRYLNLLDYSHNVLLASDVEQFAKKKTELGDELRSGKLDVFYD 114
           +H+R   +    S  +FD YL+ LD     L   D+ +F K +T+LG  L++G+L   +D
Sbjct: 50  THFRDLGISDELSGDVFDAYLDYLDGQRIYLSQDDIAKFDKIRTQLGSALKTGQLQPGFD 109

Query: 115 LYNLAQKRRFERYQYALSVLEK---PMDFTGNDTYNLDRSKAPWPKNEAELNALWDSKVK 171
           +YNL Q+R  ER Q+AL  ++K    +DF+ N++  +DRSKA W  N   L+ LW  ++K
Sbjct: 110 IYNLVQQRIIERLQFALETIDKGIDTLDFSANESILVDRSKADWESNAKALDDLWVKRIK 169

Query: 172 FDELSLKLTGKTDKEIRETLTRRYKFAIRRLAQTNSEDVFSLAMTAFAREIDPHTNYLSP 231
              L+ +L G  D+ I ETL RRY+  ++R  Q  SED F   M AF    DPHT+Y SP
Sbjct: 170 NAVLAQRLNGAEDEAIVETLRRRYEGQLKRAYQARSEDAFQAYMNAFTGMWDPHTSYFSP 229

Query: 232 RNTEQFNTEMSLSLEGIGAVLQMDDDYTVINSMVAGGPAAKSKAISVGDKIVGVGQTGKP 291
           R +E FN  MSLSLEGIGAVLQ D++YT +  +V GGPA+K   +   D+IV V Q  + 
Sbjct: 230 RTSENFNINMSLSLEGIGAVLQSDNEYTKVVRLVPGGPASKQGQLEPADRIVSVAQEDEK 289

Query: 292 MVDVIGWRLDDVVALIKGPKGSKVRLEILPAGKG--TKTRTVTLTRERIRLEDRAVK--- 346
            V+VIGWRLD+VV LI+GP+ S V LE++PA     T T T+ + R+ ++LE+++     
Sbjct: 290 PVNVIGWRLDEVVDLIRGPRNSTVTLEVIPANASDETITETIAIKRDEVKLEEQSASKDT 349

Query: 347 MSVKTVGKE-KVGVLDIPGFYV-------------GLTDDVKVQLQKLEKQNVSSVIIDL 392
           + ++  GKE  +GV+ IP FY                T DV+  + +LE   V  +++DL
Sbjct: 350 IRLERGGKEYTIGVITIPTFYADFQAMQAGDPNYKSTTRDVRNLIAELEADGVDGLVMDL 409

Query: 393 RSNGGGALTEAVSLSGLFIPAGPIVQVRDNNGKVREDSDTDGQVFYKGPLVVLVDRFSAS 452
           R+NGGGAL EA  L GLFI  GP VQ+R+ N  V+  +D D  V Y GPLVVL +R SAS
Sbjct: 410 RNNGGGALHEANDLVGLFIDKGPTVQIRNANNDVQVLNDEDPSVAYDGPLVVLTNRMSAS 469

Query: 453 ASEIFAAAMQDYGRALVVGEPTFGKGTVQQYRSLNRIYDQMLRPEWPALGSVQYTIQKFY 512
           ASEIFA A+QDYGR LVVG  TFGKGTVQ  R LN              G ++ T  KFY
Sbjct: 470 ASEIFAGAIQDYGRGLVVGSQTFGKGTVQAVRPLNH-------------GQLKITQSKFY 516

Query: 513 RVNGGSTQRKGVTPDIIMPTGNEETETGEKFEDNALPWDSIDAATYVKSGDLTAFEPELL 572
           RV+GGSTQ KGV PDI +P+  ++T  GE   D+ALPWD I+A  + +  D +    EL 
Sbjct: 517 RVSGGSTQHKGVIPDIEIPSRIDKTRIGEDALDHALPWDQIEAVPHTRYFDFSGIIDELR 576

Query: 573 KEHNARIAKDPEFQNIMKDIARFNAMKDKRNIVSLNYAVREKENNEDDATRLARLNERFK 632
           K H  R + +PEF  + ++I  F   +   + VSLN   R  E+ + + TRL   N R +
Sbjct: 577 KRHEERFSTNPEFSLLQQEI-DFLTKQRATDSVSLNLEERRAEHEQIERTRLTIANARRE 635

Query: 633 REGKPELKKLDDLPKDYQE 651
            +G+   + L+DL +D+Q+
Sbjct: 636 LKGQTPFESLEDL-EDWQD 653