Pairwise Alignments

Query, 682 a.a., carboxy-terminal protease for penicillin-binding protein 3 (NCBI) from Escherichia coli BW25113

Subject, 582 a.a., carboxy-terminal processing protease precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  137 bits (345), Expect = 1e-36
 Identities = 103/323 (31%), Positives = 163/323 (50%), Gaps = 34/323 (10%)

Query: 206 NSEDVFSLAMTAFAREIDPHTNYLSPRNTEQFNTEMSLSLEGIGAVLQMDDDYTVINSMV 265
           N  D+   AM     E+DPH+ Y+  +N E+ N+E+  S  GIG    + +D   +N+++
Sbjct: 63  NMTDLVEKAMPQILAELDPHSTYIPAQNLEEVNSELEGSFSGIGIQFTIQNDTIHVNAVI 122

Query: 266 AGGPAAKSKAISVGDKIVGVGQTGKPMVDVIGWRLDDVVAL--IKGPKGSKVRLEILPAG 323
            GGP+ K   +  GD+IV V  +       +G +L++ +A+  +KGPKGS+V+L +   G
Sbjct: 123 QGGPSEKV-GLMAGDRIVNVDDSL-----FVGKKLNNELAMRTLKGPKGSQVKLGVKRVG 176

Query: 324 KGTKTRTVTLTRERI--RLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLTDDVKV--QLQK 379
           +  K    T+TR  I     D A  ++      + +G + +  F  G T  V++   L +
Sbjct: 177 E-PKLLDFTITRGDIPQNTVDAAYMLN------DDIGYVKVSKF--GRTSHVELLNALAQ 227

Query: 380 LEKQNVSSVIIDLRSNGGGALTEAVSLSGLFIPAGPIVQVRDNNGKVREDSDTDGQ-VFY 438
           L  +    +IIDLR N GG +  A+ +   F+P G ++         R +   +G     
Sbjct: 228 LNHKKCKGLIIDLRGNTGGYMEAAIRMVNEFLPEGKLIVYTQGRKYPRAEEFANGTGSCQ 287

Query: 439 KGPLVVLVDRFSASASEIFAAAMQDYGRALVVGEPTFGKGTVQQYRSLNRIYDQMLRPEW 498
           K PLVVL+D  SASASEIF  A+QD  R  VVG  +FGKG VQQ              ++
Sbjct: 288 KMPLVVLIDEGSASASEIFTGAIQDNDRGTVVGRRSFGKGLVQQ------------PIDF 335

Query: 499 PALGSVQYTIQKFYRVNGGSTQR 521
               +++ TI ++Y  +G   QR
Sbjct: 336 SDGSAIRLTIARYYTPSGRCIQR 358