Pairwise Alignments

Query, 682 a.a., carboxy-terminal protease for penicillin-binding protein 3 (NCBI) from Escherichia coli BW25113

Subject, 565 a.a., carboxy-terminal processing protease precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  125 bits (313), Expect = 7e-33
 Identities = 101/314 (32%), Positives = 158/314 (50%), Gaps = 46/314 (14%)

Query: 222 IDPHTNYLSPRNTEQFNTEMSLSLEGIGAVLQMDDDYTVINSMVA----GGPAAKSKAIS 277
           +DP+T Y    +  +    +  S  GIG+++  +       SM+A    G PAAK+  + 
Sbjct: 74  LDPYTEYYPEEDQSELEQMVKGSFGGIGSLITYNTKLK--RSMIAEPFEGTPAAKA-GLK 130

Query: 278 VGDKIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKVRLEI-LPAGKGTKT-RTVTLTR 335
            GD ++ +   GK   D++G    +V  +++G  G+  +L++  P  KG +T    T+ R
Sbjct: 131 AGDILMEID--GK---DLLGKNNSEVSQMLRGQAGTSFKLKVERPNEKGGQTPMEFTIVR 185

Query: 336 ERIRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLTDDVKVQLQKLEKQNVSSVIIDLRSN 395
           E I+       +   TV   KVG + +  F    + D K  L  L+KQ  +S++IDLR+N
Sbjct: 186 ESIQTP----AIPYATVMDNKVGYISLSTFSGNPSKDFKKALLDLKKQGATSLVIDLRNN 241

Query: 396 GGGALTEAVSLSGLFIPAGPIVQVRDNNGKVREDSDTDGQVFYKG---------PLVVLV 446
           GGG L EAV ++  F+P G ++      GK ++ S+T     YK          P+ VLV
Sbjct: 242 GGGLLDEAVEIANYFLPRGKVIVT--TKGKTKQASNT-----YKTLREPLDLDIPIAVLV 294

Query: 447 DRFSASASEIFAAAMQDYGRALVVGEPTFGKGTVQQYRSLNRIYDQMLRPEWPALGSVQY 506
           +  +ASASEI + ++QD  RA++VG  TFGKG VQ  RSL            P  G ++ 
Sbjct: 295 NSGTASASEILSGSLQDLDRAVIVGNRTFGKGLVQVPRSL------------PYGGMMKV 342

Query: 507 TIQKFYRVNGGSTQ 520
           T  K+Y  +G   Q
Sbjct: 343 TTSKYYIPSGRCVQ 356