Pairwise Alignments

Query, 188 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 193 a.a., conserved hypothetical protein, putative integral membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  124 bits (310), Expect = 1e-33
 Identities = 71/184 (38%), Positives = 105/184 (57%), Gaps = 8/184 (4%)

Query: 8   LLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGMGMLASRFVLE 67
           LLA G++MD FA SI  G  L + ++   L   L FG  + L P IGW      S  +  
Sbjct: 8   LLAIGLAMDCFAVSIASGIILKRTQWRPMLVMALAFGLFQALMPFIGWMFAKTFSHLIES 67

Query: 68  WNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPRRRHGFWLLVTTAIATSLDAMAVGVGLA 127
            +HWIAF +L FLGGRMI+E F+  D++  +        ++ T AIATS+DA+A+G+  A
Sbjct: 68  VDHWIAFAILAFLGGRMILESFK--DEDCRQTFNPASPKVVFTMAIATSIDALAIGISFA 125

Query: 128 FLQVN----IIATALAIGCATLIMSTLGMMVGRFIGSIIGK--KAEILGGLVLIGIGVQI 181
            L +N    I++  L IG  + +MS +G+  G   G    +  KAE+ GG++L+ IG++I
Sbjct: 126 LLGINNYTEILSPILIIGFVSFVMSLIGLYFGIKCGCGCARKLKAELWGGIILVAIGLKI 185

Query: 182 LWTH 185
           L  H
Sbjct: 186 LIEH 189