Pairwise Alignments

Query, 496 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 350 a.a., GGDEF domain protein from Pseudomonas syringae pv. syringae B728a

 Score = 84.3 bits (207), Expect = 6e-21
 Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 17/182 (9%)

Query: 322 TALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTP---ELEQRLQKLVQSGSSVMF 378
           TAL +     M   L+   +R    D++T LY R+ +     ELE R Q     G S   
Sbjct: 173 TALSVRFTSSMQLSLFHIANR----DSLTNLYTRRRVLHRIRELEARRQ-----GLSASL 223

Query: 379 IAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQI 438
           I +D+D  KQIND  GH+ GD+ +  +A+ I  S+R SD A R GG+EF +++ D+TP+ 
Sbjct: 224 ILLDIDHFKQINDIHGHETGDVVLQRVAEIIGSSVRSSDMAARWGGEEFLVLMPDTTPED 283

Query: 439 AAQLPERIEKRLQH---IAPQKEIGFSS--GIYAMKENDTLHDAYKASDERLYVNKQNKN 493
           A +  ERI +R+     +  ++ I  S+   +  +   +    A   +D  LY+ KQ   
Sbjct: 284 ALRAAERIWQRIAEEAGLINERIIAVSATVAVATIATGEAFQLALNRADTSLYMGKQQGR 343

Query: 494 SR 495
           +R
Sbjct: 344 NR 345