Pairwise Alignments

Query, 496 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 418 a.a., diguanylate cyclase with PAS/PAC sensor from Pseudomonas syringae pv. syringae B728a

 Score = 88.6 bits (218), Expect = 4e-22
 Identities = 53/152 (34%), Positives = 80/152 (52%), Gaps = 2/152 (1%)

Query: 346 SDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLL 405
           SD +TGL NR+     LE+++  +  SG     I  D+D  K +ND  GH  GD  IT +
Sbjct: 263 SDPLTGLDNRRSAEHTLERQIPAVSMSGKPFSLIICDIDHFKAVNDRYGHPAGDSVITSV 322

Query: 406 AQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQH--IAPQKEIGFSS 463
           A  +KQ IR  D A R GG+EF I++ DS+ + AA+L ERI   ++   I     +  S 
Sbjct: 323 AAILKQRIRLLDVAARWGGEEFLILVPDSSLKQAAELAERIRNSVESLVIPETGSVTISL 382

Query: 464 GIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495
           G+  +   +T     + +D+ LY  K+   +R
Sbjct: 383 GVAELSAGETAASLIQRADKALYQAKRLGRNR 414