Pairwise Alignments

Query, 496 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 719 a.a., PAS:GGDEF from Pseudomonas syringae pv. syringae B728a

 Score = 91.3 bits (225), Expect = 1e-22
 Identities = 53/161 (32%), Positives = 89/161 (55%), Gaps = 6/161 (3%)

Query: 336 LYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGH 395
           LYQ + ++ ++DA+TGL NR+ L   +E  L +  ++   ++ + +D+D  KQINDTLGH
Sbjct: 275 LYQQLEKQAVTDALTGLLNRRGLYQAVESMLLRNERADKYLVVLFMDLDGFKQINDTLGH 334

Query: 396 QEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIIL-----VDSTPQIAAQLPERIEKRL 450
           + GD  +  +A+  K S+R  D   R+GGDEF +++      +   +IA +L ER+  R 
Sbjct: 335 EAGDQVLLWVAEQFKDSMRPYDVLARIGGDEFTVVIDGLDYPEQAAKIAEKLIERVSGRR 394

Query: 451 QHIAPQKEIGFSSGIYAMKE-NDTLHDAYKASDERLYVNKQ 490
           Q    +  +G S GI    +    L    +A+D  +Y  K+
Sbjct: 395 QVDGVEITLGASVGIATFPDCGSNLDGLLRAADIAMYEAKR 435