Pairwise Alignments

Query, 496 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 455 a.a., response regulator PleD from Sinorhizobium meliloti 1021

 Score = 85.1 bits (209), Expect = 5e-21
 Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)

Query: 345 ISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITL 404
           ++D +TGL+NR+ L   L+  + +    G  +     D+D+ K++NDT GH  GD  +  
Sbjct: 291 VTDDLTGLHNRRYLENHLKLLIDRATTRGRPLSICITDIDRFKRVNDTHGHDAGDDVLRE 350

Query: 405 LAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPER----IEKR---LQHIAPQK 457
            A  ++ ++R +D A R GG+EF +++ D+TP++AA + ER    +E R   +   A   
Sbjct: 351 FANRVRATVRGADLACRFGGEEFVVVMPDTTPEMAAIVAERLRLAVESRGFDIPQAATVL 410

Query: 458 EIGFSSGIYAMK-ENDTLHDAYKASDERLYVNKQNKNSR 495
            +  S GI  ++   DT     K +D  LY  K    +R
Sbjct: 411 NVTASLGIATLRPHGDTAEALLKRADMALYQAKNGGRNR 449