Pairwise Alignments

Query, 496 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 358 a.a., diguanylate cyclase from Herbaspirillum seropedicae SmR1

 Score = 85.9 bits (211), Expect = 2e-21
 Identities = 47/164 (28%), Positives = 83/164 (50%), Gaps = 3/164 (1%)

Query: 335 RLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLG 394
           R  Q + ++ ++DA+TG+ NR+     L +   + +++   +  + +D+D  KQ NDT G
Sbjct: 193 RAMQKLEQQTLTDALTGIGNRRSFDLRLREEWTRHLRNARPLSLLMVDVDYFKQYNDTYG 252

Query: 395 HQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIA 454
           H  GD  +T L + ++  +R SD+  R GGDEF +IL D+    A Q+ ERI+  ++   
Sbjct: 253 HPAGDALLTQLGRVLRSPLRASDFLARYGGDEFSLILPDTDEIGALQVAERIKAAVEQAH 312

Query: 455 PQK---EIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSR 495
            +    EI   +      E        +A+D+ +Y  K  +  R
Sbjct: 313 WEHCDIEISLGAATVTPSEMCDFSALLQAADQAMYRRKHGREPR 356