Pairwise Alignments

Query, 670 a.a., conserved inner membrane protein (NCBI) from Escherichia coli BW25113

Subject, 697 a.a., FUSC family protein from Rhodopseudomonas palustris CGA009

 Score =  110 bits (274), Expect = 3e-28
 Identities = 153/667 (22%), Positives = 273/667 (40%), Gaps = 74/667 (11%)

Query: 23  YALRNTIAMCLALTVAYYLNLDEPYWAMTSAAVVSFPTVGGVISKSLGRIAGSLLGAIAA 82
           ++ ++  A  LA  V+  + L +P+WA+ +  +VS  + G  +S+ + R AG+ +GAIA 
Sbjct: 30  FSAKSFAAAMLAYYVSLRIGLPKPFWAIVTVYIVSQTSAGASLSRGVYRFAGTFVGAIAT 89

Query: 83  LLLAGHTLNEPWFFLLSMSAWLGFCTWACAHFTNNVAYAFQLAGYTAAIIAFPMVNITEA 142
           + +  + +N+P    + ++ W+G C +         AYAF LAGYT ++I FP  ++ + 
Sbjct: 90  VAIVPNFVNDPIVCCMILAGWIGRCLFLSLLDRTPRAYAFVLAGYTTSLIGFP--SVLDP 147

Query: 143 SQLWDIAQARVCEVIVGILCGGMMMMIL---PSSSDATALLTALKNMHARLLEHASLLWQ 199
             ++D A  RV E+ +GILC  ++   +   P +   T  L+A+    AR L   +L   
Sbjct: 148 GAVFDTASLRVQEICIGILCAVLIHRYVWPKPMTGLFTGKLSAML-QDARRLASVALTAS 206

Query: 200 PETTDAIRAAHEGVIGQILTMNLLRIQAFWSHYRFRQQNARLN----ALLHQQL-RMTSV 254
            E     R        + L ++LL +Q   +H  +   +AR       L+H +L R+  +
Sbjct: 207 SEENRQRR--------EQLAVDLLMLQGLATHLPYDSASARPRRETLQLIHDRLARLLPL 258

Query: 255 ISSLRRMLLNWPSPPGATREILEQLL------TALASSQTDVYTVARIIAPLR------- 301
            S +   + +      AT + L  L+       A+          AR+I   R       
Sbjct: 259 TSEIEDRVRSLNIERVATVDELTALIIDVGGWIAVEKPDDQHAEAARLIRRARSIQKRLG 318

Query: 302 --PTNVAD------YRHVAFWQRLRYFCRLYLQSSQELHRLQSGVDDHTRLPRTSGLARH 353
              T  AD        H+A    L   C    QS     R++     H       G   H
Sbjct: 319 PDATMPADRVGANLAGHLAEMIGLLNDCDKLSQSMTASGRVRKAAALHGP-ELAKGYVYH 377

Query: 354 TDNAEAMWSGLRTFCTLMMIGAWSIASQWDAGANALTLAAISCVLYSAVAAPFKSLSLLM 413
            D   A  + L    +++   A+ I S W  G  A+++  + C L+  V  P   +   +
Sbjct: 378 RDPWMAARAALGAMVSILGGCAFWIWSAWPDGGTAVSILGVCCTLFGNVDTPVPFVVKYI 437

Query: 414 RTLVLLSLFSFVVKFGLMVQISDLWQFLLFLFPLLATMQLLKLQMPKFAALWGQLIVFMG 473
              +   L S V  F ++  +++    +  L P       L+ + P           FM 
Sbjct: 438 VGSIFGVLISLVYSFVILPHVTNFAVLVAVLAPAFLFAGSLQARAP---------TAFMA 488

Query: 474 SFIAVTNPPVY--------DFADFLNDNLAKIVGVALAWLAFAILRPGSDARKSRRHIRA 525
             I +T P +         DFA  LN  +A  V V  A ++ +I +         R +  
Sbjct: 489 MGITLTIPILSGLGTSYTGDFAASLNMAIALFVAVGFAAVSMSIFQTVPVDVSINRLLHL 548

Query: 526 LRRDFVDQLSRHPTLSESEFESLTYHHVSQLSNSQDALARRW--LLRWGVVLLNCSHVVW 583
            RRD V + +     +E+ + SL     + L     A  + +  ++   + LL   HV  
Sbjct: 549 SRRD-VGRRALGGAPNEARWTSLMIDRTALLLPRLRAARKAYADVVDDTLRLLRIGHVAG 607

Query: 584 QLRDWESRSDPLSRVRDNCISLLRGVMSE-----RGVQQKSLAATLEELQRI--CDSLAR 636
           QLR        + +++    + + G+++E     RG +  + A  ++  QRI    ++  
Sbjct: 608 QLRKM------VPQLKGEARAAIDGLLTEIAAHFRGRRPTTPAVLIDFDQRIERLTAMME 661

Query: 637 HHQPAAR 643
           H  P +R
Sbjct: 662 HCSPKSR 668