Pairwise Alignments

Query, 500 a.a., putative tripeptide transporter permease (NCBI) from Escherichia coli BW25113

Subject, 514 a.a., dipeptide/tripeptide permease DtpA from Vibrio cholerae E7946 ATCC 55056

 Score =  565 bits (1456), Expect = e-165
 Identities = 283/483 (58%), Positives = 353/483 (73%), Gaps = 5/483 (1%)

Query: 13  SLNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYG 72
           +LN FKQP AFYLIFSIE WERFG+YG+Q I+ VY+VK +GM E+ S  LF +FSALVYG
Sbjct: 24  NLNIFKQPNAFYLIFSIEFWERFGFYGMQAILTVYMVKIMGMDESASFVLFGAFSALVYG 83

Query: 73  LVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIV-----YMGMAAIAVGNG 127
            VAIGGW+GDKV+GTKR I LGAIV+ +GY L+  S  D  +V     Y+ M  I VGNG
Sbjct: 84  FVAIGGWIGDKVIGTKRAITLGAIVMMVGYVLLGLSTADHPLVGPTLIYIAMGFITVGNG 143

Query: 128 LFKANPSSLLSTCYEKNDPRLDGAFTMYYMSVNIGSFFSMIATPWLAAKYGWSVAFALSV 187
           LFKANPSSLL+  Y +NDPRLDGAFTMYYM++N+GSFFSMI TP +A K G+ +AF +S 
Sbjct: 144 LFKANPSSLLAKIYPENDPRLDGAFTMYYMAINLGSFFSMIITPLVAIKMGYGMAFGVSA 203

Query: 188 VGLLITIVNFAFCQRWVKQYGSKPDFEPINYRNLLLTIIGVVALIAIATWLLHNQEVARM 247
           VGL IT+VNF FC R +K  GS  D  P+N   L+L  +G +    + ++LL N  +A  
Sbjct: 204 VGLAITVVNFLFCLRMLKGTGSPADLMPVNKMYLVLVAVGSIIASLVCSYLLQNLTLAHG 263

Query: 248 ALGVVAFGIVVIFGKEAFAMKGAARRKMIVAFILMLEAIIFFVLYSQMPTSLNFFAIRNV 307
            L V    I+  + KEAF+M G  R KM+VAFILML+ ++FFVLY QMPTSLNFFAI NV
Sbjct: 264 ILVVAGLFILGCYFKEAFSMSGIERAKMLVAFILMLQGVVFFVLYFQMPTSLNFFAINNV 323

Query: 308 EHSILGLAVEPEQYQALNPFWIIIGSPILAAIYNKMGDTLPMPTKFAIGMVMCSGAFLIL 367
           EH I G  V PEQ+QALNPFWI+I SPILAA Y K+GD L MP KFA GM +C+ +FL+L
Sbjct: 324 EHHIFGFDVAPEQFQALNPFWIMIASPILAATYGKLGDKLAMPFKFAFGMALCALSFLVL 383

Query: 368 PLGAKFASDAGIVSVSWLVASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTT 427
             G  FA++ GI+S +WL+ASY  QSIGEL++SGLGLAMVAQLVPQR+MGF MG WFLT+
Sbjct: 384 SWGTLFANEQGIISSNWLIASYAFQSIGELLVSGLGLAMVAQLVPQRMMGFAMGMWFLTS 443

Query: 428 AGANLIGGYVAGMMAVPDNVTDPLMSLEVYGRVFLQIGVATAVIAVLMLLTAPKLHRMTQ 487
           A A +I G+VA + + P NV+    SL +YG VF QIG  TA IA++  + APKL R+ +
Sbjct: 444 ASAAVIAGWVASLTSTPANVSGATESLHIYGEVFAQIGYVTAGIAIVTFMIAPKLTRICR 503

Query: 488 DDA 490
            ++
Sbjct: 504 GES 506