Pairwise Alignments

Query, 352 a.a., electron transport complex protein RnfD (NCBI) from Escherichia coli BW25113

Subject, 350 a.a., electron transport complex, RnfABCDGE type, D subunit (RefSeq) from Shewanella loihica PV-4

 Score =  384 bits (986), Expect = e-111
 Identities = 191/350 (54%), Positives = 248/350 (70%), Gaps = 3/350 (0%)

Query: 1   MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTLVQILLASVSALLAEAL 60
           M F++ASSP+   + QT  +M  V+L A+PG  AQ +FFGWGTL+QI LA   A+  EA 
Sbjct: 1   MAFKLASSPHLSTKAQTRGLMFKVMLCALPGALAQCYFFGWGTLIQIALAIAIAVATEAA 60

Query: 61  VLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGTVFAVIIAKQLYGGLGQNP 120
           VLKLR + V  T++DNSA LTGLL+ V+IP LAPWW+  +G +FA+++ KQLYGGLG N 
Sbjct: 61  VLKLRARPVGKTIRDNSAALTGLLIGVAIPALAPWWIAAIGVIFAILVVKQLYGGLGNNI 120

Query: 121 FNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQVIFSGHTASGGDMNTLRLGI 180
           FNPAM  YV+LLISFP+QMT+W+ P   A++  G + ++ VIF G  A    +   R GI
Sbjct: 121 FNPAMAAYVMLLISFPMQMTTWVAPSGAALHDLGLMQSLSVIFQG--ADAEQVLAYRAGI 178

Query: 181 DGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGAGWQWVNLAWLAGGVWLLWQKAI 240
           DG++ ATPLD  KT +  G ++++I+    +S    G GW  +NLA+LAGG+ +L  K I
Sbjct: 179 DGVTMATPLDAVKTGLSTGLTLDEILTKASFSDGF-GIGWALINLAYLAGGLVMLKLKLI 237

Query: 241 RWHIPLSFLVTLALCAMLGWLFSPETLAAPQIHLLSGATMLGAFFILTDPVTASTTNRGR 300
           RW I  + L +L +CA +G+L SP+T   P +HL SGATML AFFI TDPVTA+T+ RGR
Sbjct: 238 RWQISTAILASLFVCASIGYLLSPDTHMGPLLHLFSGATMLAAFFIATDPVTAATSTRGR 297

Query: 301 LIFGALAGLLVWLIRSFGGYPDGVAFAVLLANITVPLIDYYTRPRVYGHR 350
           LIFG+L GLLV+LIRSF GYPD  AFAVLLAN+  P IDYY +PR YGHR
Sbjct: 298 LIFGSLIGLLVYLIRSFCGYPDAFAFAVLLANLCAPFIDYYVKPRAYGHR 347