Pairwise Alignments

Query, 193 a.a., Na(+)-translocating NADH-quinone reductase subunit E (NCBI) from Escherichia coli BW25113

Subject, 202 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  157 bits (398), Expect = 9e-44
 Identities = 86/200 (43%), Positives = 119/200 (59%), Gaps = 10/200 (5%)

Query: 1   MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLID 60
           M  Y+ L + +V + N  L  FLG+C F+ VSKK+ TAMG+G+A   V+T++     +I 
Sbjct: 1   MEHYISLLIRSVFIENMALAFFLGMCTFLAVSKKVTTAMGLGIAVVVVLTISVPANQVIY 60

Query: 61  TWILIP----------LNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLI 110
             +L P           +L +L+ + FI VIA +VQ  EM + K  P LY  LGIFLPLI
Sbjct: 61  QGLLAPGALAWAGAPEADLSFLKFITFIGVIAALVQILEMALDKYFPPLYNALGIFLPLI 120

Query: 111 TTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGN 170
           T NCA+ G     +   +   +S ++GF + VG++L +VL A IRE+L  ADVP   RG 
Sbjct: 121 TVNCAIFGAVSFMVERDYKLGESLVFGFGSGVGWALAIVLMAGIREKLKYADVPNGLRGL 180

Query: 171 AIALITAGLMSLAFMGFSGL 190
            I  ITAGLM+L FM FSG+
Sbjct: 181 GITFITAGLMALGFMSFSGV 200