Pairwise Alignments

Query, 417 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

Subject, 391 a.a., putative permease (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  121 bits (304), Expect = 3e-32
 Identities = 91/385 (23%), Positives = 177/385 (45%), Gaps = 12/385 (3%)

Query: 30  GTPQFMRVTLALFSAGLATFALLYCVQPILPVLSQEFGLTPANSSISLSISTAMLAIGLL 89
           G P  +  TLA+ +    + A +Y +QP+L ++  E G++   +++   ++    A GLL
Sbjct: 10  GLPASILWTLAIVAG--VSVANIYYIQPLLNMIRHELGISEFRTNLIAMVTQIGYAAGLL 67

Query: 90  FTGPLSDAIGRKPVMVTALLLASICTLLSTMMTSWHGILIMRALIGLSLSGVAAVGMTYL 149
           F  PL D   RK +++    +     L   +  + H IL+     G + S +  + +   
Sbjct: 68  FITPLGDLYQRKKIILVNFFVLIFSLLTIALADNIHLILLASFFTG-ACSMIPQIFIPIA 126

Query: 150 SEEIHPSFVAFSMGLYISGNSIGGMSGRLISGVFTDFFNWRIALAAIGCFALASALMFWK 209
           ++   P     ++G+ +SG   G ++ R++SG   + F WR             A++  K
Sbjct: 127 AQFSRPENKGRNVGIVLSGLLTGILASRVVSGFVGELFGWREMYYIAAAMMFVCAIVVLK 186

Query: 210 ILPESRHFRPTSLRPKTLFINFRLHWRDRGLPLL---FAEGFLLMGSFVTLFNYIGYRLM 266
           +LP+ +    T+ R K   +   L    +  P L        L  GS + +++ + +++ 
Sbjct: 187 VLPDIQ----TNFRGKYGDLMKSLLALVKEFPQLRIYSIRAALNFGSLLAMWSCLAFKMG 242

Query: 267 LSPWHVSQAVVGLLSLAYLTGTWSSPKAGTMTTRYGRGPVMLFSTGVMLFG-LLMTLFSS 325
            +P+H +  ++GLL L  + G  ++   G    R G         G++LF  LL  +  +
Sbjct: 243 QAPFHANSDIIGLLGLCGVAGALTASFVGKYVKRVGVRRFNFIGCGLILFSWLLFFVGEN 302

Query: 326 LWL-IFAGMLLFSAGFFAAHSVASSWIGPRAKRAKGQASSLYLFSYYLGSSIAGTLGGVF 384
            +L I  G+++   G         + I   + RA  + +++++ +Y++G S+   L G F
Sbjct: 303 TYLGIILGIIIIDIGMQCIQLSNQTSIFELSPRASNRINTIFMTTYFVGGSLGTFLAGTF 362

Query: 385 WHNYGWNGVGAFIALMLVIALLVGT 409
           W  YGW+GV    A +  I+LL+ T
Sbjct: 363 WQLYGWHGVIGIGATLTCISLLITT 387