Pairwise Alignments

Query, 406 a.a., DNA-binding transcriptional repressor (NCBI) from Escherichia coli BW25113

Subject, 317 a.a., ROK family transcriptional repressor, with glucokinase domain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  112 bits (281), Expect = 1e-29
 Identities = 67/269 (24%), Positives = 136/269 (50%), Gaps = 8/269 (2%)

Query: 124 LLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGIV----HRMPFYEDVKEMPLG 179
           ++ +++  +++     + K   +  I I  PGI+D  N IV      +  +E++K   L 
Sbjct: 44  VIGQLVKAVNEVKTFAEAKRYTIAGIGIGTPGIVDCTNRIVLGGAENIQGWENLK---LA 100

Query: 180 EALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGS 239
           + +E+ TG+P  + +D +   + E ++GA  GA  V+ + +   +G  VI DG L +  +
Sbjct: 101 DRMEKETGLPTQLGNDANLMGLGETMYGAGNGATHVVFLTVGTGIGGAVIIDGKLFNGYA 160

Query: 240 SSLVEIGHTQVDPYGKRCYCGNHGCLETIASVDSILELAQLRLNQSMSSMLHGQPLTVDS 299
           +   E+GH  +   G+ C CG+ GCLE  AS  +++     R+ ++  S    + +  + 
Sbjct: 161 NRGTELGHVPLIANGEPCACGSIGCLEHYASTAALVRRFSKRIAEAGIS-YPNEEINGEL 219

Query: 300 LCQAALRGDLLAKDIITGVGAHVGRILAIMVNLFNPQKILIGSPLSKAADILFPVISDSI 359
           + +   +GD +A + +      +G  +A  +N+F+PQ+++IG  LS+A D     +S+  
Sbjct: 220 IVRLYKQGDKIAAESLNEHCDFLGHGIAGFINIFSPQRVVIGGGLSEAGDFYIQKVSEKA 279

Query: 360 RQQALPAYSQHISVESTQFSNQGTMAGAA 388
            + A+P  + +  + +    N+    GAA
Sbjct: 280 LRYAIPDCAVNTEIMAASLGNKAGSIGAA 308