Pairwise Alignments

Query, 406 a.a., DNA-binding transcriptional repressor (NCBI) from Escherichia coli BW25113

Subject, 326 a.a., ROK family transcriptional repressor, with glucokinase domain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  102 bits (253), Expect = 2e-26
 Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 6/220 (2%)

Query: 176 MPLGEALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLL 235
           +PL    E+  G+P  + +D +A  + E  +GA+RG +D I + +   VG+G++ +G ++
Sbjct: 98  LPLAAMFEERLGIPTALTNDANAAAIGEMTYGAARGMKDFIMITLGTGVGSGIVINGQMV 157

Query: 236 HAGSSSLVEIGHTQVDPYGKRCYCGNHGCLETIASVDSILELAQ----LRLNQSMSSMLH 291
           +       E+GH      G+ C CG  GCLET  S   +   A+     R + S+   + 
Sbjct: 158 YGHDGFAGELGHVIARRDGRVCGCGRKGCLETYCSATGVARTAREFLAARTDASLLRNIP 217

Query: 292 GQPLTVDSLCQAALRGDLLAKDIITGVGAHVGRILAIMVNLFNPQKILIGSPLSKAADIL 351
            + +T   +  AA++GD LA++I    G  +G  LA  +   +P+ I++   L+K+ D +
Sbjct: 218 AENITSKDVYDAAVQGDKLAQEIFEFTGNILGEALADAIAFSSPEAIVLFGGLAKSGDYI 277

Query: 352 FPVISDSIRQQALPAY--SQHISVESTQFSNQGTMAGAAL 389
              I  +I    L  Y     + V   + S+   +  +AL
Sbjct: 278 MKPIQKAIDDNILNIYKGKTKLLVSELKDSDAAVLGASAL 317