Pairwise Alignments

Query, 418 a.a., putative chloride channel (VIMSS) from Escherichia coli BW25113

Subject, 448 a.a., Cl- channel, voltage gated from Pseudomonas syringae pv. syringae B728a

 Score = 87.4 bits (215), Expect = 8e-22
 Identities = 86/319 (26%), Positives = 142/319 (44%), Gaps = 34/319 (10%)

Query: 114 GSAIGREGAMILLAALAASCFAQRFTPRQE-WKLWIACGAAAGMAAAYRAPLAGSLFIAE 172
           G+++GREG  + +    A      F  R+E  ++ +  G +AG A+ +  PLAG+LF  E
Sbjct: 113 GASVGREGTAVQMGGALADQLTHVFRLRREDRRVILMAGISAGFASVFGTPLAGALFGLE 172

Query: 173 VL-FGTMMLASLGPVIISAVVALLVSNL--INHSDALLYNVQLSVTVQARDYALIISTGV 229
           VL  G M   +L P +++A+VA  V     + H+  ++  V   V VQ      +++ G+
Sbjct: 173 VLAIGRMRYDALFPCVVAAIVADQVGQAWGVVHTHYVIGEV---VPVQLWSVMAVVAAGI 229

Query: 230 LAGLCGPLLLTLMNACHRGFVSLKLAPPWQLALGGLIVGLLSLFTPAVW---GNGYSTVQ 286
           + GL G L  T  +        L    P +   GGL++ +      AVW    N Y  V 
Sbjct: 230 VFGLTGLLFATATHKLGAFVKRLITYSPLRPFAGGLLIAV------AVWALGSNHYIDVD 283

Query: 287 SF--LTAPPLLM-----IIAGIFLCKLCAVLASSGSGAPGGVFTPTLFIGLAIGMLYGRS 339
            +  L  P ++      +    +L K+   + S G+G  GG  TP  +IG  +G      
Sbjct: 284 KYIGLGIPSIVQSFQMPMAPWDWLGKMVFTVVSLGTGFKGGEVTPLFYIGATLGNALAPL 343

Query: 340 LGLWFPDGEEITLLLGLTGMATLLAATTHAPIMSTLMICEMTGEYQLLPGLLIACVIASV 399
           L L F       +L G+ G   + A   + P+ + +M  E+ G  ++ P   IAC+ + +
Sbjct: 344 LHLPF------GMLAGI-GFVAVFAGAANTPLATIVMAMELFGP-EIAPLAAIACIASYL 395

Query: 400 ISRTLHRDSIYRQHTAQHS 418
           +S       IY      HS
Sbjct: 396 VS---GHTGIYHAQRVGHS 411