Pairwise Alignments

Query, 418 a.a., putative chloride channel (VIMSS) from Escherichia coli BW25113

Subject, 436 a.a., voltage-gated chloride channel protein from Burkholderia phytofirmans PsJN

 Score = 91.7 bits (226), Expect = 4e-23
 Identities = 115/428 (26%), Positives = 181/428 (42%), Gaps = 56/428 (13%)

Query: 5   LLIATVVGILAAFAVAGFRHAMLLLEWLFLNNDSGSLVNAATNLSPWRRLLTPALGGLAA 64
           LL++ ++G LA  A A F +A+          DS + V        W   L P  G    
Sbjct: 20  LLLSCILGALAGSASALFLYAL----------DSATDVRVG---HAWLLWLLPIAG---- 62

Query: 65  GLLLMGWQKFTQQRPHAPTDYMEALQTDGQFDYAASLVKSLASLLVVTS------GSAIG 118
                GW      R   P +    L  D   D    + K +A L+++ +      G + G
Sbjct: 63  --FATGW---VYHRVGKPVEGGNNLLIDEIHDPQKIVPKRMAPLVLIATVVTHLFGGSAG 117

Query: 119 REGAMILLAALAASCFAQRF-TPRQEWKLWIACGAAAGMAAAYRAPLAGSLFIAEVL-FG 176
           REG  + +    A    + F   R++ ++ +  G AAG ++ +  PLAG++F  EVL  G
Sbjct: 118 REGTAVQMGGALADQVTKLFGLEREDRRILLMGGIAAGFSSVFGTPLAGAIFGLEVLSIG 177

Query: 177 TMMLASLGPVIISAVVALLVSNL--INHSDALLYNVQLSVTVQARDYALIISTGVLAGLC 234
            +   +L   + S++VA  V  +  I+H+   +Y +     V       +I  G+  G+ 
Sbjct: 178 RLRYDALLTCVASSLVANQVCRVWGIHHT---VYTIPFVPHVSPLGLGSVILAGIAFGVV 234

Query: 235 GPLLLTLMNACHRGFVSLKLA-PPWQLALGGLIVGLLS--LFTPAVWGNGYST-VQSFLT 290
           G L     +A    F+  ++A  P +  +GGL+V L +  L  P   G G  T V+SF  
Sbjct: 235 GMLFADSTHALS-AFIKRQIAYAPARPFVGGLVVALAATVLNVPQYLGLGIPTIVESFNQ 293

Query: 291 APPLLMIIAGIFLCKLCAVLASSGSGAPGGVFTPTLFIGLAIGMLYGRSLGLWFPDGEEI 350
           + P+       F  K    + +  SG  GG  TP  +IG  +G   G  L L  P     
Sbjct: 294 SLPVYD-----FAGKFGFTVVTLASGFKGGEVTPLFYIGATLGNALGHVLALPMP----- 343

Query: 351 TLLLGLTGMATLLAATTHAPIMSTLMICEMTGEYQLLPGLLIACVIASVISRTLHRDSIY 410
            +L GL G   + A   + PI ST+M  E+ G   +     +ACV+A + S       IY
Sbjct: 344 -VLAGL-GFVAVFAGAANTPIASTVMAIELFGA-DIGMYAALACVVAYLFS---GHTGIY 397

Query: 411 RQHTAQHS 418
           R     H+
Sbjct: 398 RAQRVGHA 405