Pairwise Alignments

Query, 418 a.a., putative chloride channel (VIMSS) from Escherichia coli BW25113

Subject, 577 a.a., voltage-gated chloride channel protein ClcB from Burkholderia phytofirmans PsJN

 Score =  285 bits (729), Expect = 3e-81
 Identities = 166/414 (40%), Positives = 249/414 (60%), Gaps = 13/414 (3%)

Query: 3   HRLLI-ATVVGILAAFAVAGFRHAMLLLEWLFLNNDSGSLVNAATNLSPWR-RLLTPALG 60
           H +LI + VVG+  AFA   FR A+ LL++  +   SGS V  A  L PW  R+  PA G
Sbjct: 22  HTMLIWSVVVGVAGAFATIAFREAIALLQFAIVGK-SGSFVEMARGL-PWTVRIWLPAAG 79

Query: 61  GLAAGLLLMGWQKFTQQRPHAPTDYMEALQT-DGQFDYAASLVKSLASLLVVTSGSAIGR 119
           GL AG LL+  +++  +  H   DYMEA+   DG      S+ +S++SL  ++SG +IGR
Sbjct: 80  GLIAGFLLLIARRYEDKCNHI--DYMEAVAIGDGVVPVKLSMWRSVSSLFTISSGGSIGR 137

Query: 120 EGAMILLAALAASCFAQ--RFTPRQEWKLWIACGAAAGMAAAYRAPLAGSLFIAEVLFGT 177
           EG M+ LAALA S   +   F P +  +L +ACGAAAG+ +AY AP+AG+ F+ E++ G+
Sbjct: 138 EGPMVQLAALAGSLIGRWVHFDPPR-LRLLVACGAAAGITSAYSAPIAGAFFVTEIVLGS 196

Query: 178 MMLASLGPVIISAVVA-LLVSNLINHSDALLYNVQLSVTVQARDYALIISTGVLAGLCGP 236
           + + S GPV++SAVVA + +     +     Y + +   V   +  L ++ G L G   P
Sbjct: 197 IAMESFGPVVVSAVVANITMREFAGYKPP--YEMPVFPPVAGLEVLLFVALGALCGAAAP 254

Query: 237 LLLTLMNACHRGFVSLKLAPPWQLALGGLIVGLLSLFTPAVWGNGYSTVQSFLTAPPLLM 296
             L L++   + F  L +  P +LALGGL+VG+LS++TP VWGNGYS V + L +P    
Sbjct: 255 QFLRLLDLSKQSFRKLPVPLPVRLALGGLVVGILSVWTPEVWGNGYSVVNAILHSPWTWT 314

Query: 297 IIAGIFLCKLCAVLASSGSGAPGGVFTPTLFIGLAIGMLYGRSLGLWFPDGEEITLLLGL 356
            +  + + K+ A  A++GSGA GGVFTPTLF+G  +G L+G+ +   +P G        +
Sbjct: 315 ALVLVLVFKIVATAATAGSGAVGGVFTPTLFVGAVVGSLFGQGMHALWPHGTSAPFAYAM 374

Query: 357 TGMATLLAATTHAPIMSTLMICEMTGEYQLLPGLLIACVIASVISRTLHRDSIY 410
            GM   LA  T AP+M+ LMI EMT  YQ++  L+++CV+A  +SR + ++S+Y
Sbjct: 375 VGMGAFLAGATQAPLMAILMIFEMTLSYQVVLPLMLSCVVAYFVSRAIGKNSMY 428