Pairwise Alignments

Query, 135 a.a., Qin prophage; predicted regulator for DicB (NCBI) from Escherichia coli BW25113

Subject, 389 a.a., Transcriptional regulator, XRE family from Xanthomonas campestris pv. campestris strain 8004

 Score = 43.5 bits (101), Expect = 3e-09
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)

Query: 11 RIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGKNLFALSKVLQCSPTWILFGD 70
          R+   RK     +R LA+ + ++  SVS +E G  EP    L  LS+ L+  P    FGD
Sbjct: 6  RLTLARKRRGMKKRELAEKIGLTEKSVSNYEAGSQEPESTTLSKLSEALR-FPEAFFFGD 64

Query: 71 EDKQPTPPVEKPVALS 86
          + + PTP V    +LS
Sbjct: 65 DPEVPTPDVASFRSLS 80