Pairwise Alignments

Query, 196 a.a., Qin prophage; predicted site-specific recombinase (NCBI) from Escherichia coli BW25113

Subject, 185 a.a., Site-specific recombinases, DNA invertase Pin homologs from Pseudomonas stutzeri RCH2

 Score =  118 bits (295), Expect = 7e-32
 Identities = 72/185 (38%), Positives = 99/185 (53%), Gaps = 6/185 (3%)

Query: 3   QIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKC 62
           Q   Y R+ST  Q  + QR  +  AG     Q+I EE ISGS    +RP   R+L  L+ 
Sbjct: 4   QQIGYARVSTQGQDLDQQRSSLAQAGC----QRIFEEKISGSKR--DRPELGRVLDHLRA 57

Query: 63  GDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAE 122
           GD L VT+LDRL  +  D+    EQL E    +  LA    D TSP G+M++ + + +A+
Sbjct: 58  GDVLTVTRLDRLARSTTDLLHIAEQLKERDAGLRSLAEPWADTTSPAGRMVLTIFAGIAD 117

Query: 123 FERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQAVFERIKSGVSISAIAREFKTSRQ 182
           FER L+ ERT +G   A+  G RFG  P L+ EQ       ++ G S+S +AR     R 
Sbjct: 118 FERSLISERTSAGRAAAKARGVRFGPKPALSLEQIAHARRLVEEGQSVSEVARLLCVHRA 177

Query: 183 TILRA 187
           T+ RA
Sbjct: 178 TLYRA 182