Pairwise Alignments

Query, 196 a.a., Qin prophage; predicted site-specific recombinase (NCBI) from Escherichia coli BW25113

Subject, 199 a.a., Resolvase domain (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 92.0 bits (227), Expect = 6e-24
 Identities = 66/193 (34%), Positives = 98/193 (50%), Gaps = 11/193 (5%)

Query: 7   YCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATS-ERPGFNRLLARLKCGDQ 65
           Y R ST  Q    QR  +      +   +I  +H  G   T+ ERPG  + LA ++ GD 
Sbjct: 8   YARCSTDKQDLAAQRTAL--LALDVAEDRIYTDH--GLTGTNRERPGLAQALAAVREGDT 63

Query: 66  LIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGI--DLTSPTGKMMMQVISAVAEF 123
           L+V KLDRL  +  D R   ++L + G++   LALG    D T P GKM   +++  AEF
Sbjct: 64  LVVPKLDRLARSVPDARAIADELEKRGVK---LALGASVHDPTDPMGKMFFNILATFAEF 120

Query: 124 ERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQAVFERIKSG-VSISAIAREFKTSRQ 182
           E DL+  RT  G+  AR  G+  G+ P L++ ++  +     +G  SIS +A  F  SR 
Sbjct: 121 EADLIRMRTKEGMAIARAKGRLKGKKPKLSDRRQAELRRMYDTGDYSISDLAELFDVSRP 180

Query: 183 TILRAKAKLQTPD 195
           T+ R   +  + D
Sbjct: 181 TVYRVLQRTPSAD 193